Tc02v2_t001110.2

Overview
NameTc02v2_t001110.2
Unique NameTc02v2_t001110.2
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length2910
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
Productdisease resistance protein At4g27190, transcript variant X2
NotePutative Disease resistance protein At4g27190
Cross References
External references for this mRNA
DatabaseAccession
GeneID18607095
GenbankXM_018115293.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc02v2_g001110Tc02v2_g001110Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc02v2_p001110.2Tc02v2_p001110.2Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto81002auto81002Theobroma cacaoexon
exon-auto81003auto81003Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto81004auto81004Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc02v2_t001110.2 ID=Tc02v2_t001110.2|Name=Tc02v2_t001110.2|organism=Theobroma cacao|type=mRNA|length=2910bp
ATGGCTGAATTGGCAAAGGAATTGCTACAAGAAATTGCAAAAGATGGGGC
AAAAGGAGCTTTCGACTACCTTATGGGGAAGCATAGTTCATGGAACAACA
TGGATAATAATTTCGACATGATGATAACTGCTGCAGAAAAGCTCCAGGCA
AAAAGGGATGATCATGAGGGGACGGTGGAACAAAATAGAACAAAAACAAC
CACCAGATGCTACAAAAAGTGGCTTAGCAGCGTTGCAAAGACTCTTCAAC
AAGTGGAAACATTAAGAGCTGAATATGATAGTGTGCGAGCCTCAGATTGG
AGGCACGGCTCAAATTATAGTAGCAAGGCCATTACCATGTGCAAGAAAGT
TGAGAGACTTGTGGAAGAGGGAGATTTTCAAGGAGGATTTTTGGTAGATA
AGCCTCCAGAAGCCATCTTAAAGTTGAACGCACCAGACCTTGAAGGATTT
CCTACCCTCCAAAGATCATTACAAGAAATACTGGAGTTGCTAAGAAGTGA
TAAACTAAAAGGAATCGGCATTTTTGGCACAGTGGGAGTTGGGAAAACAA
CAATAATGAAGAACTTGAATAACCACGAAGAAGTTGCCAAAATGTTTGAT
ATAGTCATTTGGGTAAATGTTTCAAGCGAGAGGAATGATGAGAAACTGCA
ACTGAACATTGCACAGCGACTTAAACTCAAGACGGAAGTTGCTATGTGCC
CTGGTGAACTTGCAAATATCATATCAGAAGAGATGAAGGATAAGAAGTAT
TTGCTGCTCCTAGATGAAGTCATGGACTCCATTGATTTGCAGCAGATTGG
AATCCCAGATAATGGAAATGGTAGCAAAGTGGTATTGACTACTGAATTCC
GTCATGTTTGTTCGTCAATGACAGAAAGAATGGTCAAAGTGGATCGATTA
TCTTCAGATGAGGCATGGAGGATGTTTCAACAGATAGCAGCTGAGAAAAT
AGATCTCCCTGATGTTGAACCAGTTGCTCGGCTGGTAGCAGATGAGTGTG
ATCGACTCCCACTTGTGATCAGAACAGTGGCAAGTTCCTTTAAATTAAAG
GACAGTGATTCTGAATGGAGGAATGGATTGAGAGAACTTGAAAAATGGCC
AGAAATTGAGATCCCAGGCTTAACAAACATGCATGCATTCCTTAAGTTCT
GTTATCATGAGCTGAAGGATGAGAAGAAAAAGAAATGCTTTCTGTATGGT
GCATTATATCCAGCTGATAGCAAGATATATGTTGATCATTTAGTGGAGTG
TTGGGCTGCTGAAGGACTACTTGGCACTATTGATGACAGGTGGAAATTTC
GAGTTGCACGGGATAAAGGACGTGACATATTGGGGCATCTAGTCAATGTG
TCATTGCTAGAGAAAGGTGAGAAAATGATCTATGTTCAAGTGAACAACAG
TGTCCGACAAGTTGCCTTATACATTTCCTCACAAGAGCCTGATTGCAAAT
TCATTGCTTTAAAAGGTGAACATTCATCTTATCCTCAAAATATTACAGAT
TGGCAAGAGGCAAGAAGGATCTCTATGATTGAAGGAAAACTGCATGAGTT
GCCAGAAAGTCCAAATTGCAACAAGCTTTTGTCGCTATTGCTTCAAAGAA
ATCCCAATTTGGCTACCATCCCACCATCATTTTTTCAGAACATGCAGAAA
CTTCTAGTTTTGGACTTGTACAGAACAGGAATAGCATCACTGCCATTATC
TGTATCAACATTGACTAGACTTAAGGCTCTTTTCTTAAATGATTGCCCCA
GCATAACAAAGTTGCCTCCCCAAGTTGCAGAACTTCGTTTTCTTGAGGTG
CTTGACATTCGAGGCTGCAAGATAATATTCATACCTCTTCTTATTGGCAA
ATTAGTTTACCTGAGGTGCTTGCGCATGTCATACCATAAATGCAGCAATA
CAGAAGACTATCGTGATAAGGAAATTGATTACAAAGTGATTTCAAGTCTT
TCAAGATTGGAGGAACTGATGATTGATGTGACCCCCTATGGCCATTGGTG
CATTGATGTTGCAAAAAGAGTCATTCAGGAGGTGGCTTTCTTGAAGAATT
TAACTACTCTCAGAATAAGCTTTCCGCGACCAGAGATCCTCAAAATGTTT
ATTGAAAACAGGCCATCATGGAGGGATCACGAACAATTAACCTCATTTTG
GTTTTTTGTTGGCTGTGAAAGCGAAAACAACCCTCTGATTCTTGACTGTT
TGGAATACAAGGTAAATAGATATATGCGATACTGCTATACTGGCAATGAT
GATTCTACAGTTCGTGATGTCCTTCCTAAAACTGATGCATTGGAATTGAT
CGGTCACAACAACATCAAATGTCTATCAGACTTCATGAATGTTGCCAGCC
TGAACCATGTTCGCAGTTGTCTGATTGAGCGATGCGATAAAATCACAAGT
ACTATAGATGCCGAAAGGGAAGGAGAAATGGACATTCTACCGATCTTGGA
ACAGTTACATTTAAGGAATTTGCTCCTTCTGAAGAGCATTTTCGAAGGCC
CCATTTCAGGAAAAAGCTTGTCAAAACTACATACTATTGTAGTGAAGTGT
TGTCCAATGTTGACAAAGCTATTTTCCAATGGGGTGATTCAACAGCTCTC
AAAACTCAAAAAATTGGTAATGGAAAGTTGCTTCAAGATAGAAAAGTTGA
TTGAGCTTCCAAGTCTAGAGATTTTGGAACTGGTTGACATGCCGAAATTA
AGAACTATATCTGGGGATGAGTCATTGGCATGGCCCCAGTTAAAGGTGCT
TAAGATATTTGGATGTCCCAAGGTGAAATCACTACCTTTCAGTAAAAACA
ATGCAACAGAGCTAAAATTAATAGAAGGAGAACAACTATGGTGGGAAGCA
TTGCAGTGGCAAGACAGTGAGGTTAGAGACCACCTTCAATCCTTCTGCAG
CCTCAGGTGA
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protein sequence of Tc02v2_p001110.2

>Tc02v2_p001110.2 ID=Tc02v2_p001110.2|Name=Tc02v2_p001110.2|organism=Theobroma cacao|type=polypeptide|length=970bp
MAELAKELLQEIAKDGAKGAFDYLMGKHSSWNNMDNNFDMMITAAEKLQA
KRDDHEGTVEQNRTKTTTRCYKKWLSSVAKTLQQVETLRAEYDSVRASDW
RHGSNYSSKAITMCKKVERLVEEGDFQGGFLVDKPPEAILKLNAPDLEGF
PTLQRSLQEILELLRSDKLKGIGIFGTVGVGKTTIMKNLNNHEEVAKMFD
IVIWVNVSSERNDEKLQLNIAQRLKLKTEVAMCPGELANIISEEMKDKKY
LLLLDEVMDSIDLQQIGIPDNGNGSKVVLTTEFRHVCSSMTERMVKVDRL
SSDEAWRMFQQIAAEKIDLPDVEPVARLVADECDRLPLVIRTVASSFKLK
DSDSEWRNGLRELEKWPEIEIPGLTNMHAFLKFCYHELKDEKKKKCFLYG
ALYPADSKIYVDHLVECWAAEGLLGTIDDRWKFRVARDKGRDILGHLVNV
SLLEKGEKMIYVQVNNSVRQVALYISSQEPDCKFIALKGEHSSYPQNITD
WQEARRISMIEGKLHELPESPNCNKLLSLLLQRNPNLATIPPSFFQNMQK
LLVLDLYRTGIASLPLSVSTLTRLKALFLNDCPSITKLPPQVAELRFLEV
LDIRGCKIIFIPLLIGKLVYLRCLRMSYHKCSNTEDYRDKEIDYKVISSL
SRLEELMIDVTPYGHWCIDVAKRVIQEVAFLKNLTTLRISFPRPEILKMF
IENRPSWRDHEQLTSFWFFVGCESENNPLILDCLEYKVNRYMRYCYTGND
DSTVRDVLPKTDALELIGHNNIKCLSDFMNVASLNHVRSCLIERCDKITS
TIDAEREGEMDILPILEQLHLRNLLLLKSIFEGPISGKSLSKLHTIVVKC
CPMLTKLFSNGVIQQLSKLKKLVMESCFKIEKLIELPSLEILELVDMPKL
RTISGDESLAWPQLKVLKIFGCPKVKSLPFSKNNATELKLIEGEQLWWEA
LQWQDSEVRDHLQSFCSLR*
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