Tc01v2_t034270.1

Overview
NameTc01v2_t034270.1
Unique NameTc01v2_t034270.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length2079
Properties
Property NameValue
NoteGlutamine-fructose-6-phosphate transaminase (Isomerizing)s,sugar binding,transaminases isoform 1
Model evidenceSupporting evidence includes similarity to: 2 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
Productglutamine--fructose-6-phosphate aminotransferase [isomerizing] 2
Cross References
External references for this mRNA
DatabaseAccession
GeneID18614587
GenbankXM_007052406.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc01v2_g034270Tc01v2_g034270Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc01v2_p034270.1Tc01v2_p034270.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto75960auto75960Theobroma cacaoexon
exon-auto75961auto75961Theobroma cacaoexon
exon-auto75962auto75962Theobroma cacaoexon
exon-auto75963auto75963Theobroma cacaoexon
exon-auto75964auto75964Theobroma cacaoexon
exon-auto75965auto75965Theobroma cacaoexon
exon-auto75966auto75966Theobroma cacaoexon
exon-auto75967auto75967Theobroma cacaoexon
exon-auto75968auto75968Theobroma cacaoexon
exon-auto75969auto75969Theobroma cacaoexon
exon-auto75970auto75970Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto75971auto75971Theobroma cacaoCDS
CDS-auto75972auto75972Theobroma cacaoCDS
CDS-auto75973auto75973Theobroma cacaoCDS
CDS-auto75974auto75974Theobroma cacaoCDS
CDS-auto75975auto75975Theobroma cacaoCDS
CDS-auto75976auto75976Theobroma cacaoCDS
CDS-auto75977auto75977Theobroma cacaoCDS
CDS-auto75978auto75978Theobroma cacaoCDS
CDS-auto75979auto75979Theobroma cacaoCDS
CDS-auto75980auto75980Theobroma cacaoCDS
CDS-auto75981auto75981Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc01v2_t034270.1 ID=Tc01v2_t034270.1|Name=Tc01v2_t034270.1|organism=Theobroma cacao|type=mRNA|length=2079bp
ATGTGCGGGACCTTCGCTTACCTGAACTACAACGTCACGCGTGACAGACG
CTTCATTCTGGAGATCCTCTTCAATGGCTTGAGGCGGTTGGAGTACAGAG
GCTATGACTCCGCCGGGATTTCCATCGATTCTTCGTCTCCATCGTTCCTA
TCTGCGGATCCGAACGGACAGTTTGCCGATTCTGCCCCTCCTCCTCTCGT
CTTTCGCCAAGAAGGCAACATAGAATCACTCGTTAAATCCGTCTACAAAG
ATGTCGCGTCAACAGAGCTGAATTTGGAGGAACCTTTTTCTGTTCATGCT
GGACTAGCACACACCCGGTGGGCAACTCATGGAGAGCCATCTCCAAAAAA
CAGCCATCCTCAGACATCTGGTGCTGGAAATGAGTTCTTGGTTGTTCACA
ATGGCATCATTACAAACTATGAGGTGTTGAAGGAAACACTGATCCGGCAT
GGTTTCAACTTTGAATCTGACACTGACACAGAAGTGATTCCAAAGCTTGC
AAAATATGTTTTTGACAAGGCAAATGAAGAAGGTGACCAGACTGTCACAT
TCAGTCAAGTTGTGCTTGAAGTTATGAGGCATCTTGAAGGAGCCTATGCC
CTTATATTCAAAAGTCGTCACTATCCAAATGAGTTGATTGCTTGTAAACG
TGGTAGTCCATTGCTTTTAGGTGTCAAAGAATTAAGTGAAGACACAAGCA
GTGGAGCTTCATTTCTTGATCTTAAGTTCATTTCAGAAAATGGGCGTCCA
AAAGAACTTTTTCTATCCAGTGATGCTAGTGCTGTAGTTGAACACACAAA
AAAGGTTCTGGTGATTGAAGATGGTGAAGTAGTTCACCTTAAGGATGGAG
GTGTCTCTATTCTTAAATTTGAGAATGACAAAGGAAAACATGGCAGTGCA
CTTTCTAGACCATCATCAGTGCAACGTGCATTATCTTTTCTTGAGATGGA
GGTTGAGCAAATCAACAAAGGAAAATATGACCATTATATGCAGAAAGAAA
TACATGAACAACCAGAATCTCTTACAACCACAATGCGGGGAAGACTTATT
CGTGGAGGTTCTTGCAAAGCCAAGACTGTGCTTTTAGGTGGACTGAAAGA
TCACATAAAAACTATTAGGCGGAGCAGACGTATTGTTTTTATTGGATGTG
GTACAAGCTATAATGCTGCTTTAGCTGCAAGACCTATTATTGAAGAACTC
TCTGGTGTTCCTGTTACTATGGAGATTGCTAGTGATCTGGTGGATCGGCA
GGGTCCAATTTATAGAGAAGACACTGCAGTTTTTGTTAGTCAATCTGGTG
AAACTGCAGATACTCTTCTTGCATTAGAGTATGCCCTTGAAAATGGCGCA
CTATGTGTTGGCATAACAAATACTGTTGGTAGTGCAATAGCCAGGAACAC
ACATTGTGGAATTCACATAAATGCTGGCTGTGAGATAGGGGTGGCAAGTA
CGAAGGCATACACAAGTCAAATTGTTGTGATGGCAATGCTAGCTCTGGCT
ATTGGAGATGATGCAATATCTAGTCAAGCCAGACGAGAGGCTATTATAGA
TGGTCTATTTGATTTGCCAAATAAAGTTAGAGAGGCACTCAAGCTTGACC
AGGAAATGAAGGATCTGGCTAAATTATTGATTGCTGAGCAGTCACTTCTT
GTATTTGGAAGAGGATATAATTTTGCAACAGCATTAGAGGGCGCATTAAA
AGTAAAAGAGGTGTCTCTTATGCACAGTGAGGGAATACTTGCAGGTGAAA
TGAAACACGGTCCTTTGGCTCTAGTTGATGAAAATCTCCCAATTATTGTT
ATTGCTACACGTGATGCATGCTTCAGTAAGCAGCAGTCAGTTATCCAGCA
ACTTCATGCCCGCAAAGGCCGCCTTATAGTGATGTGTTCTAAAGGAGATG
CAGCATCTGTATGTCCTGGTGAATCTTGTCGAGTGATTGAAGTTCCTCAG
GTTGAAGATTGTCTTCAACCTGTGGTTAATATTATTCCTTTGCAGTTGTT
GGCATATCACCTTACTGTTCTGCGGGGTCACAATGTTGACCAACCTCGGA
ATCTTGCGAAGAGCGTAACAACCCAATGA
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protein sequence of Tc01v2_p034270.1

>Tc01v2_p034270.1 ID=Tc01v2_p034270.1|Name=Tc01v2_p034270.1|organism=Theobroma cacao|type=polypeptide|length=693bp
MCGTFAYLNYNVTRDRRFILEILFNGLRRLEYRGYDSAGISIDSSSPSFL
SADPNGQFADSAPPPLVFRQEGNIESLVKSVYKDVASTELNLEEPFSVHA
GLAHTRWATHGEPSPKNSHPQTSGAGNEFLVVHNGIITNYEVLKETLIRH
GFNFESDTDTEVIPKLAKYVFDKANEEGDQTVTFSQVVLEVMRHLEGAYA
LIFKSRHYPNELIACKRGSPLLLGVKELSEDTSSGASFLDLKFISENGRP
KELFLSSDASAVVEHTKKVLVIEDGEVVHLKDGGVSILKFENDKGKHGSA
LSRPSSVQRALSFLEMEVEQINKGKYDHYMQKEIHEQPESLTTTMRGRLI
RGGSCKAKTVLLGGLKDHIKTIRRSRRIVFIGCGTSYNAALAARPIIEEL
SGVPVTMEIASDLVDRQGPIYREDTAVFVSQSGETADTLLALEYALENGA
LCVGITNTVGSAIARNTHCGIHINAGCEIGVASTKAYTSQIVVMAMLALA
IGDDAISSQARREAIIDGLFDLPNKVREALKLDQEMKDLAKLLIAEQSLL
VFGRGYNFATALEGALKVKEVSLMHSEGILAGEMKHGPLALVDENLPIIV
IATRDACFSKQQSVIQQLHARKGRLIVMCSKGDAASVCPGESCRVIEVPQ
VEDCLQPVVNIIPLQLLAYHLTVLRGHNVDQPRNLAKSVTTQ*
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