Tc01v2_t033760.2

Overview
NameTc01v2_t033760.2
Unique NameTc01v2_t033760.2
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length621
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
Productrac-like GTP-binding protein RAC2, transcript variant X1
NoteRac-like GTP-binding protein 7
Cross References
External references for this mRNA
DatabaseAccession
GeneID18614531
GenbankXM_018114103.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc01v2_g033760Tc01v2_g033760Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc01v2_p033760.2Tc01v2_p033760.2Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto75334auto75334Theobroma cacaoexon
exon-auto75335auto75335Theobroma cacaoexon
exon-auto75336auto75336Theobroma cacaoexon
exon-auto75337auto75337Theobroma cacaoexon
exon-auto75338auto75338Theobroma cacaoexon
exon-auto75339auto75339Theobroma cacaoexon
exon-auto75340auto75340Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto75341auto75341Theobroma cacaoCDS
CDS-auto75342auto75342Theobroma cacaoCDS
CDS-auto75343auto75343Theobroma cacaoCDS
CDS-auto75344auto75344Theobroma cacaoCDS
CDS-auto75345auto75345Theobroma cacaoCDS
CDS-auto75346auto75346Theobroma cacaoCDS
CDS-auto75347auto75347Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc01v2_t033760.2 ID=Tc01v2_t033760.2|Name=Tc01v2_t033760.2|organism=Theobroma cacao|type=mRNA|length=621bp
ATGAGTACTGCAACAGCAGCAGCAGCTGCAACACAAACAAAATTCATAAA
ATGTGTGACAGTTGGGGATGGAGCTGTTGGGAAGACATGTCTCCTTATCT
CTTACACTAGCAATACCTTCCCAACTGATTATGTTCCTACTGTTTTTGAT
AACTTCAGCGCCAATGTCATGGTCGATGGACGGACTGTCAATTTGGGTCT
CTGGGATACTGCTGGTCAGGAAGACTATAACAGGTTGAGACCTCTAAGTT
ACAGAGGAGCTGATGTATTCCTTCTTGCTTTCTCCCTCATAAGTAGGCCT
AGCTATGAGAACGTATCCAAAAAAAAGTGGGTCCCAGAGCTGAGACATTA
TGCCCCATCAGTGCCCATTGTTCTTGTGGGGACCAAACTAGATTTAAGAG
AAGACAGGCAGTTCCACTTGGATTATCCAGGGGCGTGTACCATTTCGACA
GAACAGGGTCTTGAACTAAAGAAGCAAATAGGAGCACTGGCTTACATGGA
GTGTAGCTCGAAGACACAGCAGAATGTGAAAGCTGTATTTGATGCTGCTA
TCAAGGTGGTTCTCCAGCCTCCAAAGCAAAAGAGGCAAAAGAAGAAATCA
AGAATCTGCCGTGTTCTTTAA
back to top

protein sequence of Tc01v2_p033760.2

>Tc01v2_p033760.2 ID=Tc01v2_p033760.2|Name=Tc01v2_p033760.2|organism=Theobroma cacao|type=polypeptide|length=207bp
MSTATAAAAATQTKFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFD
NFSANVMVDGRTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISRP
SYENVSKKKWVPELRHYAPSVPIVLVGTKLDLREDRQFHLDYPGACTIST
EQGLELKKQIGALAYMECSSKTQQNVKAVFDAAIKVVLQPPKQKRQKKKS
RICRVL*
back to top