Tc01v2_t033300.1

Overview
NameTc01v2_t033300.1
Unique NameTc01v2_t033300.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1350
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
Productphospholipase A(1) DAD1, chloroplastic
NotePhospholipase A(1) DAD1, chloroplastic
Cross References
External references for this mRNA
DatabaseAccession
GeneID18614479
GenbankXM_018120941.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc01v2_g033300Tc01v2_g033300Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc01v2_p033300.1Tc01v2_p033300.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto74428auto74428Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto74429auto74429Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc01v2_t033300.1 ID=Tc01v2_t033300.1|Name=Tc01v2_t033300.1|organism=Theobroma cacao|type=mRNA|length=1350bp
ATGAATCTCTCCATGAAAGCTGCAAGGCCATGCACATTTCCAGCCACAAC
CACACAGACACCCATGCCTAGCAAGCACGTTTCTATCTGTTGCTGCACCA
TCGCTCAGCCGGTCGTCAGACCACTCAAGAAGTCCATAGATAGCCAAAGG
GTGAAGAGCTGGGAACATCTGCTCGACCCTGTTGACTACAACCAAACAGC
TTCCCTGTTCACGTCTAAAGCTGTTAAAATCGGCAATAGATGGGAGCAGT
ACCAAGGAATCCAAAACTGGGAAGGTCTACTTGATCCATTGGACGAAAAT
TTGCGAGGCGAAATTCTTCGATACGGGTTTTTCGTTGAAGCCGCATATAG
GTCCTTTGACTTCGACTCCTCCTCGCCAACATATGCAACATGCCGCTATC
CCAAAAGCACATTTCTAGACCGTTCCGGGCTACCCGAAACCGGTTATCGA
CTAACCCGAAATTTACGTGCGACATCAGGAATCCAGTTGCCACGTTGGGT
TGAAAAAGCACCAAGTTGGGTGGCAACTCAGTCCAGCTGGATTGGTTACG
TGGCAGTTTGTCAGGACAAAGAGGAAATCGCCAGGCTGGGTCGAAGAGAT
GTGGTGATTGCTTACAGAGGCACCGCTACTGGCCTCGAATGGCTGGAAAA
TCTACGCGCTACCCTGACTCCCCTCCCCAATGCTGACTCCAAACCTGGTC
CTGACGGTTCGGAACCCATGGTGGAAAGTGGGTTCTTGAGCCTTTACACT
TCAGGAACCGCCGAGTCACCGAGTCTACAAGAAATGATCCGTGAAGAGAT
CTTACGGTTGCTCCAAACATACGGCGACGAGCCTCTTAGCTTAACCATCA
CAGGGCACAGTCTTGGAGCGGCTCTGGCCACGCTCACAGCTTATGACATA
AAAACCACCTTCAAACGTGCTCCACTCGTGACTGTCATGTCCTTCGGAGG
TCCACGTGTCGGAAACAGGAGCTTCCGTCGCCAGCTAGAAAAACAAGGCA
CTAAAGTGTTAAGAATAGTGAACTCGGATGATCTGATAACCAAAGTACCT
GGCTTCGTACTGGAAGAAGATGCTGACGTGTCAAAAAGCCAAGACATCCA
CGTGGCGGGCTTGCCTAGCTGGATCCAGAAGCGAGTCGAGGACACCCAGT
GGGTCTATGCGGAGGTAGGCAGAGAGCTCAGGCTCCGCAGCAGAGACTCT
CCGTACCTTAACACTATCAACGTTGCCACGTGTCACGAGCTCAAGACCTA
CCTCCATTTGGTCAGCGGATTCGTGAGCTCCACGTGTCCATTCCGAGCCA
CCGTGAGCAGAGTCCTCGACTACCATAACCGAGGGCAAGCCACGGCGTAA
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protein sequence of Tc01v2_p033300.1

>Tc01v2_p033300.1 ID=Tc01v2_p033300.1|Name=Tc01v2_p033300.1|organism=Theobroma cacao|type=polypeptide|length=450bp
MNLSMKAARPCTFPATTTQTPMPSKHVSICCCTIAQPVVRPLKKSIDSQR
VKSWEHLLDPVDYNQTASLFTSKAVKIGNRWEQYQGIQNWEGLLDPLDEN
LRGEILRYGFFVEAAYRSFDFDSSSPTYATCRYPKSTFLDRSGLPETGYR
LTRNLRATSGIQLPRWVEKAPSWVATQSSWIGYVAVCQDKEEIARLGRRD
VVIAYRGTATGLEWLENLRATLTPLPNADSKPGPDGSEPMVESGFLSLYT
SGTAESPSLQEMIREEILRLLQTYGDEPLSLTITGHSLGAALATLTAYDI
KTTFKRAPLVTVMSFGGPRVGNRSFRRQLEKQGTKVLRIVNSDDLITKVP
GFVLEEDADVSKSQDIHVAGLPSWIQKRVEDTQWVYAEVGRELRLRSRDS
PYLNTINVATCHELKTYLHLVSGFVSSTCPFRATVSRVLDYHNRGQATA*
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