Tc01v2_t031710.5

Overview
NameTc01v2_t031710.5
Unique NameTc01v2_t031710.5
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length615
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productglutathione S-transferase zeta class, transcript variant X4
NoteGlutathione S-transferase zeta class
Cross References
External references for this mRNA
DatabaseAccession
GeneID18614299
GenbankXM_007051993.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc01v2_g031710Tc01v2_g031710Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc01v2_p031710.5Tc01v2_p031710.5Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto71453auto71453Theobroma cacaoexon
exon-auto71454auto71454Theobroma cacaoexon
exon-auto71455auto71455Theobroma cacaoexon
exon-auto71456auto71456Theobroma cacaoexon
exon-auto71457auto71457Theobroma cacaoexon
exon-auto71458auto71458Theobroma cacaoexon
exon-auto71459auto71459Theobroma cacaoexon
exon-auto71460auto71460Theobroma cacaoexon
exon-auto71461auto71461Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto71462auto71462Theobroma cacaoCDS
CDS-auto71463auto71463Theobroma cacaoCDS
CDS-auto71464auto71464Theobroma cacaoCDS
CDS-auto71465auto71465Theobroma cacaoCDS
CDS-auto71466auto71466Theobroma cacaoCDS
CDS-auto71467auto71467Theobroma cacaoCDS
CDS-auto71468auto71468Theobroma cacaoCDS
CDS-auto71469auto71469Theobroma cacaoCDS
CDS-auto71470auto71470Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc01v2_t031710.5 ID=Tc01v2_t031710.5|Name=Tc01v2_t031710.5|organism=Theobroma cacao|type=mRNA|length=615bp
ATGGCACCGAAAGATGGTGGCGAGGCGTCTTCCAAGCTCGTTTTGTATTC
ATACTGGCAGAGCTCCTGTTCTTGGCGTGTTCGCTTCGCTTTGAACCTCA
AAGGGCTTTCATATGAGTACAAAGCGGTGAACCTTGCGAAAGGAGAGCAG
TTTACTCCAGATTTTGAGAAGTTGAACCCTCTCCATTTTGTTCCGGTTCT
AGTTGATGGTGATGTTGTAGTCTCTGATTCGTATGCAATCTTGATGTATT
TGGAGGAAAAGTATCCTCAAAGAACTCTCTTACCAGCTGATCCCCAGCAA
AAAGCCCTGAATCTTCAGAAATATCTTGAGGAAAAGGTTGGCCTAGAAGA
GCGACTTCTATTTGTTCAAACTAATATTGAAAAAGGTTTCCTTGCTCTTG
AGAAGTTGCTGAAAGACTTTGTTGGCAAATATGCCACAGGAGAAGAAGTA
TACATGGCTGATGTATTTATGGCACCTCAGATTGCTGTGGCTACAGAACG
GTTTAAGATTGACATGTCCAAGTTCCCTACTTTAAGTAGGATATACGAGT
CCCAGAGGGCATTACCTGAATTCTTAGCTGCCTCACCTGAAAGACAACCT
GATGCTGTCCATTGA
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protein sequence of Tc01v2_p031710.5

>Tc01v2_p031710.5 ID=Tc01v2_p031710.5|Name=Tc01v2_p031710.5|organism=Theobroma cacao|type=polypeptide|length=205bp
MAPKDGGEASSKLVLYSYWQSSCSWRVRFALNLKGLSYEYKAVNLAKGEQ
FTPDFEKLNPLHFVPVLVDGDVVVSDSYAILMYLEEKYPQRTLLPADPQQ
KALNLQKYLEEKVGLEERLLFVQTNIEKGFLALEKLLKDFVGKYATGEEV
YMADVFMAPQIAVATERFKIDMSKFPTLSRIYESQRALPEFLAASPERQP
DAVH*
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