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Properties
Property Name | Value |
Model evidence | Supporting evidence includes similarity to: 5 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns |
Product | 4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic, transcript variant X1 |
Note | 4-hydroxy-tetrahydrodipicolinate synthase 2, chloroplastic |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc01v2_t031560.1 ID=Tc01v2_t031560.1|Name=Tc01v2_t031560.1|organism=Theobroma cacao|type=mRNA|length=1101bp ATGGCTACTTTGAAGAGCTATGGCGTGCGCTTGGAAGAGTCTACTCACCA GTTTCCGCGTCCCAATCGCGGCGATAATTACAAGAGCAGGAGAAATGCAA AATGGAGGTCTCCACAAGCAGCAGTAATACCTAATTTCCATCTCCCAATG CGTAGTTTTGAGGTTAAAAACAGAACATCATCAGAAGATATAAAATCTCT CCGATTGATAACAGCTATCAAAACCCCATATTTACCTGATGGAAGGTTTG ATCTTGAAGCTTATGATGGCTTGGTGAATATCCAAATTGAAAATGGTGCT GAAGGTGTAATTGTCGGTGGCACAACTGGCGAGGGCCAGCTGATGAGCTG GGATGAACACATAATGCTTATTGGTCATACAGTCAACTGTTTTGGTGGAT CAATTAAGGTAATTGGTAACACAGGAAGCAACTCAACAAGGGAAGCAATT CATGCCACTGAACAAGGTTTTGCAGTTGGAATGCATGCTGCTCTTCACAT CAATCCTTACTATGGCAAAACATCTCTGGAGGGCTTGGTTTCTCACTTTG ATAGTGTGCTGCCAATGGGCCCCACCATCATATACAATGTGCCATCACGA ACTGGCCAAGATATTCCCCCACGTGTCATCAATACGGTAGCACAGTGTCC TAACTTGGCCGGTGTTAAGGAATGTGTTGGAAATGACCGGATTGAGCAGT ATACAGATAATGGAATTGTAGTGTGGAGTGGGAATGATGATCAGTGCCAT GATGCTAGGTGGAGCCATGGGGCTACTGGGGTAATTTCTGTTACAAGCAA CCTGATTCCAGGTTTGATGCGAGAACTAATGTTTGGAGGGAAAAACCCTT CGCTTAATGTGAAGCTCTTACCTCTGATTGAGTGGCTCTTTGAGGAACCC AACCCCATTGGCCTAAACACAGCCCTTGCACAACTTGGGGTTGTGAGGCC AGTTTTCAGGTTACCATATGTACCTCTTCCTCTGGCAAAGAGGGTAGAAT TTGTTAATCTTGTCAGGCAAATTGGGCGGCAGAATTTTGTAGGAGAAAAA GATGTTCAGGTTCTTGATGATGATGACTTCATCTTGGTTGGGCGGTATTA G back to topprotein sequence of Tc01v2_p031560.1 >Tc01v2_p031560.1 ID=Tc01v2_p031560.1|Name=Tc01v2_p031560.1|organism=Theobroma cacao|type=polypeptide|length=367bp
MATLKSYGVRLEESTHQFPRPNRGDNYKSRRNAKWRSPQAAVIPNFHLPM RSFEVKNRTSSEDIKSLRLITAIKTPYLPDGRFDLEAYDGLVNIQIENGA EGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAI HATEQGFAVGMHAALHINPYYGKTSLEGLVSHFDSVLPMGPTIIYNVPSR TGQDIPPRVINTVAQCPNLAGVKECVGNDRIEQYTDNGIVVWSGNDDQCH DARWSHGATGVISVTSNLIPGLMRELMFGGKNPSLNVKLLPLIEWLFEEP NPIGLNTALAQLGVVRPVFRLPYVPLPLAKRVEFVNLVRQIGRQNFVGEK DVQVLDDDDFILVGRY* back to top
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