Tc01v2_t031270.1

Overview
NameTc01v2_t031270.1
Unique NameTc01v2_t031270.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length999
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
Productglyoxylate/hydroxypyruvate reductase HPR3
NoteGlyoxylate/hydroxypyruvate reductase HPR3
Cross References
External references for this mRNA
DatabaseAccession
GeneID18614255
GenbankXM_007051925.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc01v2_g031270Tc01v2_g031270Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc01v2_p031270.1Tc01v2_p031270.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto70467auto70467Theobroma cacaoexon
exon-auto70468auto70468Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto70469auto70469Theobroma cacaoCDS
CDS-auto70470auto70470Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc01v2_t031270.1 ID=Tc01v2_t031270.1|Name=Tc01v2_t031270.1|organism=Theobroma cacao|type=mRNA|length=999bp
ATGGAGCATCATCAAGAACGAAGCGATCACCGATCCCAAGACCTCCCTCA
AGTCCTAGTCATCAAACCACCACCAGTTTTGACACTTTTTGAGGACAAAT
TCATCTCAAGCAAATTCCAACTCTTAAAAGCATGGGAGTCAACACTCCCA
CTAGATCAGTTCTTGACCAACTATGCAGGCTCAGTTCGAGCCGTCCTCTG
TTCTGGTGCTTCCCCTATCACCGCCGACATCATCCGGTTGCTACCTTCAT
TGCAACTCGTCATAACCGCCAGCGCAGGTGTCAATCACATTGACTTGACG
GAGTGCAGGAGGCTTGGCATCGCAGTGACCAACGCTGCAGGTGTGTTCTC
GGATGATGGTGCTGACGCTGCTGTGGGGTTGTTGATTGACGTGCTCAGAA
AGGTTTCTGCTGCTGATCGGTACGTTAGAAATGGTCTTTGGCCCGCGAAA
GGAGACTACGCTCTTGGTTCTAAGCTGGGAGGCAAGCGAGTTGGGGTTGT
TGGACTCGGAGGGTTTGGCTCAGCAGTTGCCAAAAGGCTAGAGGCCTTTG
GCTGCACCGTGTTGTACAACTCTCGAACGCAAAAACCTTCTGTTCCATAC
CCCTTCTACTCCACCGTTCTCGAACTCGCCGCCGACAGCGACTCCCTCAT
CATTTGCTGCGGATTAACTGCTGAAACTCGGCACATGATTAACAGGGAAG
TCTTGTTGGTACTAGGGAAGCAAGGAGTCATCGTCAACATAGCTCGAGGA
GCCATTATCAATGAGAAGGAAATGGTGGAGTGTCTGGTGCGGGGAGAGAT
CGGAGGAGCTGGTTTGGATGTGTTTGAGAACGAACCCAATGTTCCCGAAG
AGCTCTTTGGATTGGATAATGTGGTGCTGTCACCACATAGAGTTGTTTTC
ACACCAGAATCCTTCGTGGCTGCCTCTGAACTGGTGGTGGGGAACTTGGA
AGCTTTCTTTTCAAACAAGCCATTACTTTCTCCTGTCATCTATGAATGA
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protein sequence of Tc01v2_p031270.1

>Tc01v2_p031270.1 ID=Tc01v2_p031270.1|Name=Tc01v2_p031270.1|organism=Theobroma cacao|type=polypeptide|length=333bp
MEHHQERSDHRSQDLPQVLVIKPPPVLTLFEDKFISSKFQLLKAWESTLP
LDQFLTNYAGSVRAVLCSGASPITADIIRLLPSLQLVITASAGVNHIDLT
ECRRLGIAVTNAAGVFSDDGADAAVGLLIDVLRKVSAADRYVRNGLWPAK
GDYALGSKLGGKRVGVVGLGGFGSAVAKRLEAFGCTVLYNSRTQKPSVPY
PFYSTVLELAADSDSLIICCGLTAETRHMINREVLLVLGKQGVIVNIARG
AIINEKEMVECLVRGEIGGAGLDVFENEPNVPEELFGLDNVVLSPHRVVF
TPESFVAASELVVGNLEAFFSNKPLLSPVIYE*
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