Tc01v2_t030770.2

Overview
NameTc01v2_t030770.2
Unique NameTc01v2_t030770.2
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1110
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 3 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
Productcell division protein FtsY homolog, chloroplastic, transcript variant X3
NoteCell division protein FtsY homolog, chloroplastic
Cross References
External references for this mRNA
DatabaseAccession
GeneID18614202
GenbankXM_018129280.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc01v2_g030770Tc01v2_g030770Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc01v2_p030770.2Tc01v2_p030770.2Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto69265auto69265Theobroma cacaoexon
exon-auto69266auto69266Theobroma cacaoexon
exon-auto69267auto69267Theobroma cacaoexon
exon-auto69268auto69268Theobroma cacaoexon
exon-auto69269auto69269Theobroma cacaoexon
exon-auto69270auto69270Theobroma cacaoexon
exon-auto69271auto69271Theobroma cacaoexon
exon-auto69272auto69272Theobroma cacaoexon
exon-auto69273auto69273Theobroma cacaoexon
exon-auto69274auto69274Theobroma cacaoexon
exon-auto69275auto69275Theobroma cacaoexon
exon-auto69276auto69276Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto69277auto69277Theobroma cacaoCDS
CDS-auto69278auto69278Theobroma cacaoCDS
CDS-auto69279auto69279Theobroma cacaoCDS
CDS-auto69280auto69280Theobroma cacaoCDS
CDS-auto69281auto69281Theobroma cacaoCDS
CDS-auto69282auto69282Theobroma cacaoCDS
CDS-auto69283auto69283Theobroma cacaoCDS
CDS-auto69284auto69284Theobroma cacaoCDS
CDS-auto69285auto69285Theobroma cacaoCDS
CDS-auto69286auto69286Theobroma cacaoCDS
CDS-auto69287auto69287Theobroma cacaoCDS
CDS-auto69288auto69288Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc01v2_t030770.2 ID=Tc01v2_t030770.2|Name=Tc01v2_t030770.2|organism=Theobroma cacao|type=mRNA|length=1110bp
ATGGCTTTCCCTACTCAGCTCTCACTCATTTCCAAACCCTCACCGCTCTT
TTCGAACTTACCTCGAACCCGGTTCAATCCATCCACAACAGCCAGACCAA
CCGCTTCCCGTTTCAAATGCCTGGCGAGTCAGACCGGGTTCTTCACTCGA
CTCGGTCGGTTAATCAAGGAAAAGGCCAAGAGTGACGTTGAAAAGATCTT
CTCAGGGTTCTCCAAGACCAGAGACAACCTCGCCGTGATCGACGAACTCT
TGTTATACTGGAACCTCGCTGACACTGATCGCGTCCTCGACGAACTCGAA
GAGGCTTTATTGGTATCTGATTTTGGGCCAAGAATTACAATTAAAATAGT
GGAGAGCTTGCGGGAGGATATACTAAGTGGAAAACTTAAATCAGGAAGTG
AAATAAAGGATGCATTGAAGAAGTGTGTGTTGGATCTCTTGACAAAGAAG
GGGAGTAAGACCGAGCTTCGTCTTGGATTCAGGAAGCCAGCTGTGATCAT
GATTGTTGGCGTTAATGGAGGTGGCAAGACAACATCACTTGGAAAGCTGG
CTTATAGATTAAAGAATGAAGGGGCAAAGATATTGATGGCAGCAGGTGAC
ACATTCAGAGCAGCTGCTAGTGATCAACTAGAGATATGGGCTGAGAGAAC
TGGTTGTGAGATTGTTGTAGCTGAAAAGGAGAATGCCAAAGCATCATCAG
TGCTTTCGCAGGCTGTCAAAAGAGGTAAGGAGCAAGGTTTTGATATTGTC
TTGTGTGACACATCTGGACGTCTTCACACTAATTTCAGCTTGATGGAAGA
GTTGATAGCCTGTAAGAAGGCTGTGGGAAAAGTTATTCCTGGTGCACCCA
ATGAGATCCTACTAGTTCTTGACGGGAACACTGGATTGAATATGCTTCCA
CAAGCAAGAGAGTTCAATGAGGTAGTTGGAATAACTGGTTTTGTTTTGAC
AAAACTTGATGGTTCTGCTAGAGGTGGCTGTGTGGTCAGCGTGGTTGATG
AGCTTGGCATTCCTGTGAAGTTTCTAGGTGTTGGTGAAGGTCTCGAAGAC
CTTCAACCTTTTGATGCAGAGGCATTTGTTAATGCCATATTTCCGTATTT
TATTCATTGA
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protein sequence of Tc01v2_p030770.2

>Tc01v2_p030770.2 ID=Tc01v2_p030770.2|Name=Tc01v2_p030770.2|organism=Theobroma cacao|type=polypeptide|length=370bp
MAFPTQLSLISKPSPLFSNLPRTRFNPSTTARPTASRFKCLASQTGFFTR
LGRLIKEKAKSDVEKIFSGFSKTRDNLAVIDELLLYWNLADTDRVLDELE
EALLVSDFGPRITIKIVESLREDILSGKLKSGSEIKDALKKCVLDLLTKK
GSKTELRLGFRKPAVIMIVGVNGGGKTTSLGKLAYRLKNEGAKILMAAGD
TFRAAASDQLEIWAERTGCEIVVAEKENAKASSVLSQAVKRGKEQGFDIV
LCDTSGRLHTNFSLMEELIACKKAVGKVIPGAPNEILLVLDGNTGLNMLP
QAREFNEVVGITGFVLTKLDGSARGGCVVSVVDELGIPVKFLGVGEGLED
LQPFDAEAFVNAIFPYFIH*
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