Tc01v2_t030660.1

Overview
NameTc01v2_t030660.1
Unique NameTc01v2_t030660.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length924
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 2 ESTs, 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
Product( )-neomenthol dehydrogenase
Note( )-neomenthol dehydrogenase
Cross References
External references for this mRNA
DatabaseAccession
GeneID18614192
GenbankXM_018123008.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc01v2_g030660Tc01v2_g030660Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc01v2_p030660.1Tc01v2_p030660.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto68949auto68949Theobroma cacaoexon
exon-auto68950auto68950Theobroma cacaoexon
exon-auto68951auto68951Theobroma cacaoexon
exon-auto68952auto68952Theobroma cacaoexon
exon-auto68953auto68953Theobroma cacaoexon
exon-auto68954auto68954Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto68955auto68955Theobroma cacaoCDS
CDS-auto68956auto68956Theobroma cacaoCDS
CDS-auto68957auto68957Theobroma cacaoCDS
CDS-auto68958auto68958Theobroma cacaoCDS
CDS-auto68959auto68959Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc01v2_t030660.1 ID=Tc01v2_t030660.1|Name=Tc01v2_t030660.1|organism=Theobroma cacao|type=mRNA|length=924bp
ATGGCTGAAGGTGAACGGTCAGCCTTTCTTGCAGCCAAAAGGCATGCAGT
TGTAACAGGAGCAAACAAGGGAATTGGTTTTGAGCTATGCAGGAACCTGG
CGTCAAAAGGGATCATGGTAGTTTTGACTTCTAGAGATGAGAAAAGGGGA
CTTGAAGCTGTTGCAAAATTGAAAGATTCTGGTCTGTCTGCTCATGTAGT
ATTTCATCAACTTGATGTAACAGATCCTTCTAGTATTGCTTCCCTTGCAG
ATTTTGTCAAAGCTAAATTTGGGAAACTTGATATCTTGGTTAACAATGCT
GGGATTTTTGGAGCGATTCTACATCCACAGGCTTTTGCCACAGCTACTGA
ACTTGCTGGTTACTTTCCAACTGAAGAGCGAGCCAAAGAGTATGAGATTG
GAACTCAAACTTTTGAGTTGGCGGAAGAATGCTTGAAAACCAACTACTAT
GGTGCAAGAAGAATGGTTGAAGCATTTGTTCCCCTTCTCCAGTTATCTGA
CTCACCGAGAATTGTCAATGTTTCCTCTATTATGGGGTTATTGAAGAATA
TACCCAGTCAGTGGGCTAAGGAAGGATTAAGTGATGTCGAAAGTCTTACA
GAGGATCGAGTGGATGAAGTTTTGAAGCAGTTTCTTAAAGATTTTAAAGA
AGGATCATTAAAAGCTAAAGGTTGGCCTACGTATTTCTCTGCCTATACAC
TCTCTAAAGCAGCAATGAATGCCTACACAAGGATTCTGGCCAAGACGTAC
CCAAGTTTCCTTGTTAATTCCATTGGCCCAGGCTTTGTGAAAACTGATAT
AACTTGCAATATTGGGGTCCTAACTGCTGCTGAAGGAGCTGAAAATGTTG
CCAGGCTAGCACTGCTGTCAAATGATGGGCCTTCAGGCCTTCTTTTCATC
AGGAAGGAAGTCTCATGTTTTTAA
back to top

protein sequence of Tc01v2_p030660.1

>Tc01v2_p030660.1 ID=Tc01v2_p030660.1|Name=Tc01v2_p030660.1|organism=Theobroma cacao|type=polypeptide|length=308bp
MAEGERSAFLAAKRHAVVTGANKGIGFELCRNLASKGIMVVLTSRDEKRG
LEAVAKLKDSGLSAHVVFHQLDVTDPSSIASLADFVKAKFGKLDILVNNA
GIFGAILHPQAFATATELAGYFPTEERAKEYEIGTQTFELAEECLKTNYY
GARRMVEAFVPLLQLSDSPRIVNVSSIMGLLKNIPSQWAKEGLSDVESLT
EDRVDEVLKQFLKDFKEGSLKAKGWPTYFSAYTLSKAAMNAYTRILAKTY
PSFLVNSIGPGFVKTDITCNIGVLTAAEGAENVARLALLSNDGPSGLLFI
RKEVSCF*
back to top