Tc01v2_t030620.2

Overview
NameTc01v2_t030620.2
Unique NameTc01v2_t030620.2
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length942
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Product( )-neomenthol dehydrogenase, transcript variant X1
Note( )-neomenthol dehydrogenase
Cross References
External references for this mRNA
DatabaseAccession
GeneID18614186
GenbankXM_007051817.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc01v2_g030620Tc01v2_g030620Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc01v2_p030620.2Tc01v2_p030620.2Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto68899auto68899Theobroma cacaoexon
exon-auto68900auto68900Theobroma cacaoexon
exon-auto68901auto68901Theobroma cacaoexon
exon-auto68902auto68902Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto68903auto68903Theobroma cacaoCDS
CDS-auto68904auto68904Theobroma cacaoCDS
CDS-auto68905auto68905Theobroma cacaoCDS
CDS-auto68906auto68906Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc01v2_t030620.2 ID=Tc01v2_t030620.2|Name=Tc01v2_t030620.2|organism=Theobroma cacao|type=mRNA|length=942bp
ATGGAGGTTCTCTATTTGCCATACAGTAACATGCCTTTCTGGTTGCTGAG
TTCTTTTCCTTCTGTCAGGTATGCAGTTGTGACAGGGGCAAACAAGGGCA
TTGGACTTGAAATATGTAAGCAGTTAGCCTGTAAAGGGATCACGGTGGTG
TTAACTGCTAGAGATGAGAAAAGGGGTCTTGAGGCTCTTGAAAATCTGAA
ACACTCTGGTCTCTCGGATCATCTAGTTTTCCACCAGCTTGATGTGGCCG
ACCCTGCAAGCATCGCTTCTCTAGCAGATTTTGTGAAGAAACAGTTTGGG
AAGCTTGATATCTTGGTGAACAATGCCGGGATAGTAGGAGTAAACATTGA
TGCTTTAAACGCTTCAGACATTTCCGGTGCTCAGGAAGGTTGGAATACCA
TTTGGAGTAAATTGAGTGCAACTTACGAGGCAGCAGAAGAATGCCTGAAA
ACAAACTACTATGGCGCTATAAGAACAGCCGAAGCACTTATTCCCTTGCT
GCAGTTATCTGACTTACCAAGGATTGTAAACGTTTCCTCCTCTGTGGTCA
TGTTAAAGCATACTACCGGTGAACGGCTCAAAGGAATATTAACTGGTTTT
ACCACTGAAGAGAAGCTGAACGACTTCCTCACTGAATATCTGAAAGATTT
TAAGGAGGGTTTACTAGAAAGTAAAGGTTGGCCAACCGCCTTCTCTGCCT
ATACAGTCTCAAAAGTAGCCATGAATGCCCACACAAGGATTCTGGCCAAG
AAGTATCCGAATTTCTGCATCAACTGTGTTTGCCCTGGCTTTGTCAAAAC
AGATATAAATTTCAATACTGGTAAGTTAACTGTTGAAGAAGGCGCCGCAA
GTCCTGTTAAGTTAGCACTATTGCCAAATGGTGGTCCTTCTGGCCTTTTC
TTCAATCGGAGTGAACCTGCAAGTTTCGACTCAGATAATTGA
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protein sequence of Tc01v2_p030620.2

>Tc01v2_p030620.2 ID=Tc01v2_p030620.2|Name=Tc01v2_p030620.2|organism=Theobroma cacao|type=polypeptide|length=314bp
MEVLYLPYSNMPFWLLSSFPSVRYAVVTGANKGIGLEICKQLACKGITVV
LTARDEKRGLEALENLKHSGLSDHLVFHQLDVADPASIASLADFVKKQFG
KLDILVNNAGIVGVNIDALNASDISGAQEGWNTIWSKLSATYEAAEECLK
TNYYGAIRTAEALIPLLQLSDLPRIVNVSSSVVMLKHTTGERLKGILTGF
TTEEKLNDFLTEYLKDFKEGLLESKGWPTAFSAYTVSKVAMNAHTRILAK
KYPNFCINCVCPGFVKTDINFNTGKLTVEEGAASPVKLALLPNGGPSGLF
FNRSEPASFDSDN*
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