Tc01v2_t030510.2

Overview
NameTc01v2_t030510.2
Unique NameTc01v2_t030510.2
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length2205
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 2 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
Productacetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, chloroplastic, transcript variant X1
NoteAcetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, chloroplastic
Cross References
External references for this mRNA
DatabaseAccession
GeneID18614175
GenbankXM_007051801.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc01v2_g030510Tc01v2_g030510Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc01v2_p030510.2Tc01v2_p030510.2Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto68596auto68596Theobroma cacaoexon
exon-auto68597auto68597Theobroma cacaoexon
exon-auto68598auto68598Theobroma cacaoexon
exon-auto68599auto68599Theobroma cacaoexon
exon-auto68600auto68600Theobroma cacaoexon
exon-auto68601auto68601Theobroma cacaoexon
exon-auto68602auto68602Theobroma cacaoexon
exon-auto68603auto68603Theobroma cacaoexon
exon-auto68604auto68604Theobroma cacaoexon
exon-auto68605auto68605Theobroma cacaoexon
exon-auto68606auto68606Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto68607auto68607Theobroma cacaoCDS
CDS-auto68608auto68608Theobroma cacaoCDS
CDS-auto68609auto68609Theobroma cacaoCDS
CDS-auto68610auto68610Theobroma cacaoCDS
CDS-auto68611auto68611Theobroma cacaoCDS
CDS-auto68612auto68612Theobroma cacaoCDS
CDS-auto68613auto68613Theobroma cacaoCDS
CDS-auto68614auto68614Theobroma cacaoCDS
CDS-auto68615auto68615Theobroma cacaoCDS
CDS-auto68616auto68616Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc01v2_t030510.2 ID=Tc01v2_t030510.2|Name=Tc01v2_t030510.2|organism=Theobroma cacao|type=mRNA|length=2205bp
ATGGCTACCATATCATTAGTAGCTGGAAATTGTGGAAGGGGAAGAGGATG
TGAAGATCGAAGGTTTGAATTCGGGTCGAACTCATATTTCGGGAAGGACT
TTTTGGCTAGTGAATTGCTTATTAGATCATTTAGAAGAGCAAATGGGTAT
TGGTCAAAAGCTTTAAAAGGTTCTAGGAATGACAATGGGAAGAAGTTTCG
TGTTATTGCAAAAGTCAAGAGAGGGAAGAAGTATGATTACCCCTGGCCTG
ATGATATTGATCCGAATATCACGGATGGACACTTAACTTACCTGTCTTAC
TTCAAGCCTTTGGATGAGAAACCAAAACCGGTGACTCTACCATTCGAGAA
GCCACTGGTTGATCTTGAGCAAAAGATTATTGAGGTATGTAGAATGGCTG
ATGAAACTGGTCTGGATTTTACTGATCAAATTGGAGCTTTGGAAAACAAG
TATCAACAGGCACTGAAAGATTTATACACACATTTGACACCCATTCAACG
CCTGACCATTGCTCGACATCCCAATAGACCAACAGTTCTTGATCATATAT
TAAATATCACAGAGAAGTGGGTGGAACTCCATGGAGATCGTGCAGGCTAT
GATGATCCAGCTATGGTAACTGGTATAGGCAGCATGGATGGTAAGAGCTA
CATGTTTATAGGCCATCAGAAAGGTAGGAACACAAAGGAGAACATTTTAC
GCAATTTTGCAATGCCAACTCCCCATGGCTATCGGAAGGCTTTGCGAATG
ATGAAGTATGCTGATCATCATGGTCTTCCTATTATTACATTTGTTGACAC
TCCTGGGGCCTTCGCTGATCTCAAATCAGAGGAACTTGGTCAAGGGGAAG
CAATTGCCCATAACCTGAGGACCATGTTTGGCCTTAAAGTGCCAATTGTA
ACTGTTGTTGTTGGTGAGGGTGGTTCTGGAGGGGCGCTGGCCATTGCTTG
CCCCAATAAATTGTTTATGCTTGAGAACTCTGTTCTGTATGTTGCAAGTC
CTGAAGCATGTGCTGCTATACTGTGGAAATCTTCTCAAGCAGCTCCTAAG
GCAGCTGAAAAACTGAGGATAACAGCTCAAGAACATTACAAGCGCAAAAT
TGCTGATGGCATCATCCCTGAACCTCTTGGAGGTGCACATGCTGATCCTG
TATGGACTTCCCAACAAATTAAACTTGCAATCACTCAGGCCATGGAGGAA
TTAACAAAAATGGATACAGAAGAGTTGCTTCGCCACCGAATGCTCAAATT
TCGGTCAATTGGAGGTTTCCAAGAAGGTAAGCCAGTGGAACCTGAAAGAA
AACACAACATGAAGCCTTCTGATGCCAGCATGCTGAAAGCTGCTGATATA
GAATCAGATCTTGAGAGGATAAAGAAGAAGATTTTGGAGGCAAAGGTACC
TTCAGATCCAATTACAGACCAAGCAATAGAAAAACTTAAGCAGGATGTTG
ACAAGGAGGTTACCAGGGCATTCATTTCAATGGGCTTGCAAGAGAAGCTT
GAATCACTGAAGTTGGAATTATCCAGAGCTCCTGCTAATCAGCACCTTAA
TCGCAATTTAAAGGAGAAGGTGGATAAACTGATGCATGAATTTAAACAAA
ATTTGTCACGGCCAGGGGCCTATCTTGGCTTAAAGCAAAAGCTTGAAAAG
CTAAGCATGGTTAGCAGACTTGTTGAGCTGAAAGAGAAAAGTGAGAAACT
GAAAACTGAGATTAATCAGAAGATTCCGGCAGAGGTCAAGGCAAAGTTGG
AGCAATTGGAAAATGCTCAGGAAGGATTGTCGAAAGGTGACCCACTGGAC
AAGGATTTGGTGGCAGAGGCAGTAAAAGCTAAGAAAGAACTAATGGAAGT
TTTGAAGTCAGCTAACTTGGAGATTGTTGGAGTGAGAAAGAGAGAGGTCA
CAGCTGCACCTCCAGAAATACAAGAGAAGATTGTAAATGTGAACAAAGAG
ATCGGTGGAGAGATTGAAAGGATAATTGATGTAGCAGGTCTTCGTGGCAA
AATTGAGGAGTTGAAGGCAGAGATGGCTAAAGGCTCCAGTTCACAAAAAG
CAGAAGAACTTGAAACAGAGATCAAGGAGGGGATTCTTGCTGCCTTGGAT
AACACGGCACTAAAACAGAAGGTTGAGAAGTTGAGAACAGAATTTGCATC
ATCCTTGGAAGTAGCAACCGATGACAAGGTTGCTGCTGAAAACGGCAGGT
GGTGA
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protein sequence of Tc01v2_p030510.2

>Tc01v2_p030510.2 ID=Tc01v2_p030510.2|Name=Tc01v2_p030510.2|organism=Theobroma cacao|type=polypeptide|length=735bp
MATISLVAGNCGRGRGCEDRRFEFGSNSYFGKDFLASELLIRSFRRANGY
WSKALKGSRNDNGKKFRVIAKVKRGKKYDYPWPDDIDPNITDGHLTYLSY
FKPLDEKPKPVTLPFEKPLVDLEQKIIEVCRMADETGLDFTDQIGALENK
YQQALKDLYTHLTPIQRLTIARHPNRPTVLDHILNITEKWVELHGDRAGY
DDPAMVTGIGSMDGKSYMFIGHQKGRNTKENILRNFAMPTPHGYRKALRM
MKYADHHGLPIITFVDTPGAFADLKSEELGQGEAIAHNLRTMFGLKVPIV
TVVVGEGGSGGALAIACPNKLFMLENSVLYVASPEACAAILWKSSQAAPK
AAEKLRITAQEHYKRKIADGIIPEPLGGAHADPVWTSQQIKLAITQAMEE
LTKMDTEELLRHRMLKFRSIGGFQEGKPVEPERKHNMKPSDASMLKAADI
ESDLERIKKKILEAKVPSDPITDQAIEKLKQDVDKEVTRAFISMGLQEKL
ESLKLELSRAPANQHLNRNLKEKVDKLMHEFKQNLSRPGAYLGLKQKLEK
LSMVSRLVELKEKSEKLKTEINQKIPAEVKAKLEQLENAQEGLSKGDPLD
KDLVAEAVKAKKELMEVLKSANLEIVGVRKREVTAAPPEIQEKIVNVNKE
IGGEIERIIDVAGLRGKIEELKAEMAKGSSSQKAEELETEIKEGILAALD
NTALKQKVEKLRTEFASSLEVATDDKVAAENGRW*
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