Tc01v2_t030510.1

Overview
NameTc01v2_t030510.1
Unique NameTc01v2_t030510.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length2205
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 2 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
Productacetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, chloroplastic, transcript variant X2
NoteAcetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, chloroplastic
Cross References
External references for this mRNA
DatabaseAccession
GeneID18614175
GenbankXM_018114005.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc01v2_g030510Tc01v2_g030510Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc01v2_p030510.1Tc01v2_p030510.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto68573auto68573Theobroma cacaoexon
exon-auto68574auto68574Theobroma cacaoexon
exon-auto68575auto68575Theobroma cacaoexon
exon-auto68576auto68576Theobroma cacaoexon
exon-auto68577auto68577Theobroma cacaoexon
exon-auto68578auto68578Theobroma cacaoexon
exon-auto68579auto68579Theobroma cacaoexon
exon-auto68580auto68580Theobroma cacaoexon
exon-auto68581auto68581Theobroma cacaoexon
exon-auto68582auto68582Theobroma cacaoexon
exon-auto68583auto68583Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto68584auto68584Theobroma cacaoCDS
CDS-auto68585auto68585Theobroma cacaoCDS
CDS-auto68586auto68586Theobroma cacaoCDS
CDS-auto68587auto68587Theobroma cacaoCDS
CDS-auto68588auto68588Theobroma cacaoCDS
CDS-auto68589auto68589Theobroma cacaoCDS
CDS-auto68590auto68590Theobroma cacaoCDS
CDS-auto68591auto68591Theobroma cacaoCDS
CDS-auto68592auto68592Theobroma cacaoCDS
CDS-auto68593auto68593Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc01v2_t030510.1 ID=Tc01v2_t030510.1|Name=Tc01v2_t030510.1|organism=Theobroma cacao|type=mRNA|length=2205bp
ATGGCTACCATATCATTAGTAGCTGGAAATTGTGGAAGGGGAAGAGGATG
TGAAGATCGAAGGTTTGAATTCGGGTCGAACTCATATTTCGGGAAGGACT
TTTTGGCTAGTGAATTGCTTATTAGATCATTTAGAAGAGCAAATGGGTAT
TGGTCAAAAGCTTTAAAAGGTTCTAGGAATGACAATGGGAAGAAGTTTCG
TGTTATTGCAAAAGTCAAGAGAGGGAAGAAGTATGATTACCCCTGGCCTG
ATGATATTGATCCGAATATCACGGATGGACACTTAACTTACCTGTCTTAC
TTCAAGCCTTTGGATGAGAAACCAAAACCGGTGACTCTACCATTCGAGAA
GCCACTGGTTGATCTTGAGCAAAAGATTATTGAGGTATGTAGAATGGCTG
ATGAAACTGGTCTGGATTTTACTGATCAAATTGGAGCTTTGGAAAACAAG
TATCAACAGGCACTGAAAGATTTATACACACATTTGACACCCATTCAACG
CCTGACCATTGCTCGACATCCCAATAGACCAACAGTTCTTGATCATATAT
TAAATATCACAGAGAAGTGGGTGGAACTCCATGGAGATCGTGCAGGCTAT
GATGATCCAGCTATGGTAACTGGTATAGGCAGCATGGATGGTAAGAGCTA
CATGTTTATAGGCCATCAGAAAGGTAGGAACACAAAGGAGAACATTTTAC
GCAATTTTGCAATGCCAACTCCCCATGGCTATCGGAAGGCTTTGCGAATG
ATGAAGTATGCTGATCATCATGGTCTTCCTATTATTACATTTGTTGACAC
TCCTGGGGCCTTCGCTGATCTCAAATCAGAGGAACTTGGTCAAGGGGAAG
CAATTGCCCATAACCTGAGGACCATGTTTGGCCTTAAAGTGCCAATTGTA
ACTGTTGTTGTTGGTGAGGGTGGTTCTGGAGGGGCGCTGGCCATTGCTTG
CCCCAATAAATTGTTTATGCTTGAGAACTCTGTTCTGTATGTTGCAAGTC
CTGAAGCATGTGCTGCTATACTGTGGAAATCTTCTCAAGCAGCTCCTAAG
GCAGCTGAAAAACTGAGGATAACAGCTCAAGAACATTACAAGCGCAAAAT
TGCTGATGGCATCATCCCTGAACCTCTTGGAGGTGCACATGCTGATCCTG
TATGGACTTCCCAACAAATTAAACTTGCAATCACTCAGGCCATGGAGGAA
TTAACAAAAATGGATACAGAAGAGTTGCTTCGCCACCGAATGCTCAAATT
TCGGTCAATTGGAGGTTTCCAAGAAGGTAAGCCAGTGGAACCTGAAAGAA
AACACAACATGAAGCCTTCTGATGCCAGCATGCTGAAAGCTGCTGATATA
GAATCAGATCTTGAGAGGATAAAGAAGAAGATTTTGGAGGCAAAGGTACC
TTCAGATCCAATTACAGACCAAGCAATAGAAAAACTTAAGCAGGATGTTG
ACAAGGAGGTTACCAGGGCATTCATTTCAATGGGCTTGCAAGAGAAGCTT
GAATCACTGAAGTTGGAATTATCCAGAGCTCCTGCTAATCAGCACCTTAA
TCGCAATTTAAAGGAGAAGGTGGATAAACTGATGCATGAATTTAAACAAA
ATTTGTCACGGCCAGGGGCCTATCTTGGCTTAAAGCAAAAGCTTGAAAAG
CTAAGCATGGTTAGCAGACTTGTTGAGCTGAAAGAGAAAAGTGAGAAACT
GAAAACTGAGATTAATCAGAAGATTCCGGCAGAGGTCAAGGCAAAGTTGG
AGCAATTGGAAAATGCTCAGGAAGGATTGTCGAAAGGTGACCCACTGGAC
AAGGATTTGGTGGCAGAGGCAGTAAAAGCTAAGAAAGAACTAATGGAAGT
TTTGAAGTCAGCTAACTTGGAGATTGTTGGAGTGAGAAAGAGAGAGGTCA
CAGCTGCACCTCCAGAAATACAAGAGAAGATTGTAAATGTGAACAAAGAG
ATCGGTGGAGAGATTGAAAGGATAATTGATGTAGCAGGTCTTCGTGGCAA
AATTGAGGAGTTGAAGGCAGAGATGGCTAAAGGCTCCAGTTCACAAAAAG
CAGAAGAACTTGAAACAGAGATCAAGGAGGGGATTCTTGCTGCCTTGGAT
AACACGGCACTAAAACAGAAGGTTGAGAAGTTGAGAACAGAATTTGCATC
ATCCTTGGAAGTAGCAACCGATGACAAGGTTGCTGCTGAAAACGGCAGGT
GGTGA
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protein sequence of Tc01v2_p030510.1

>Tc01v2_p030510.1 ID=Tc01v2_p030510.1|Name=Tc01v2_p030510.1|organism=Theobroma cacao|type=polypeptide|length=735bp
MATISLVAGNCGRGRGCEDRRFEFGSNSYFGKDFLASELLIRSFRRANGY
WSKALKGSRNDNGKKFRVIAKVKRGKKYDYPWPDDIDPNITDGHLTYLSY
FKPLDEKPKPVTLPFEKPLVDLEQKIIEVCRMADETGLDFTDQIGALENK
YQQALKDLYTHLTPIQRLTIARHPNRPTVLDHILNITEKWVELHGDRAGY
DDPAMVTGIGSMDGKSYMFIGHQKGRNTKENILRNFAMPTPHGYRKALRM
MKYADHHGLPIITFVDTPGAFADLKSEELGQGEAIAHNLRTMFGLKVPIV
TVVVGEGGSGGALAIACPNKLFMLENSVLYVASPEACAAILWKSSQAAPK
AAEKLRITAQEHYKRKIADGIIPEPLGGAHADPVWTSQQIKLAITQAMEE
LTKMDTEELLRHRMLKFRSIGGFQEGKPVEPERKHNMKPSDASMLKAADI
ESDLERIKKKILEAKVPSDPITDQAIEKLKQDVDKEVTRAFISMGLQEKL
ESLKLELSRAPANQHLNRNLKEKVDKLMHEFKQNLSRPGAYLGLKQKLEK
LSMVSRLVELKEKSEKLKTEINQKIPAEVKAKLEQLENAQEGLSKGDPLD
KDLVAEAVKAKKELMEVLKSANLEIVGVRKREVTAAPPEIQEKIVNVNKE
IGGEIERIIDVAGLRGKIEELKAEMAKGSSSQKAEELETEIKEGILAALD
NTALKQKVEKLRTEFASSLEVATDDKVAAENGRW*
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