Tc01v2_t030450.1

Overview
NameTc01v2_t030450.1
Unique NameTc01v2_t030450.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1485
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
ProductO-glucosyltransferase rumi homolog, transcript variant X2
NoteDownstream target of A 2
Cross References
External references for this mRNA
DatabaseAccession
GeneID18614168
GenbankXM_018115617.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc01v2_g030450Tc01v2_g030450Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc01v2_p030450.1Tc01v2_p030450.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto68440auto68440Theobroma cacaoexon
exon-auto68441auto68441Theobroma cacaoexon
exon-auto68442auto68442Theobroma cacaoexon
exon-auto68443auto68443Theobroma cacaoexon
exon-auto68444auto68444Theobroma cacaoexon
exon-auto68445auto68445Theobroma cacaoexon
exon-auto68446auto68446Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto68447auto68447Theobroma cacaoCDS
CDS-auto68448auto68448Theobroma cacaoCDS
CDS-auto68449auto68449Theobroma cacaoCDS
CDS-auto68450auto68450Theobroma cacaoCDS
CDS-auto68451auto68451Theobroma cacaoCDS
CDS-auto68452auto68452Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc01v2_t030450.1 ID=Tc01v2_t030450.1|Name=Tc01v2_t030450.1|organism=Theobroma cacao|type=mRNA|length=1485bp
ATGGGGAACGATGTTAAAGTTTTTCAAGGCTTTTGGCGTCATGGTGATCA
AGTCTGTGGTTGCTTTTCCAAGATTGGTTTTGGACGGATCAAGAGACTGG
TTTCCACAACTGCTTGCATAATCTTCTTCTTCCTCCTCCTCACTGCTGCC
TTGGTTCCTTGGATACATGTGCCTATTATACAGGGCAACCCATTTCCCCA
GATGATTTTTTCCTCACGAAGTAGTATTAAAAAACACCATTCAAGAACTG
AATACCCTCTAAACTGCTCTGATTCAGGTTTGCAACAAAAATGCCCAAAC
AATTATCCTTTGGTATTTGAGCCTGGTAAATTGTCAACAGAAACTTGTCC
GGACTACTTTCGGTGGATCCACCATGATTTACAACCCTGGAAGAATTCAG
GAATTACAAAAGACATGATTGAAAGAGGGAAACTGAGTGCAGAGCTTAGA
CTTGTGATTGTCAAGGGTGAGCTTTATATGGAGAAGTCTGGCCACCCTTT
CCAAACCAGAGATTTATTTACGATATGGGGCATTTTGCAGCTTCTAAGGT
TTTACCCTGGAAAGCTACCAGATTTAGACCTTTTGTTCTATACTGGAGAC
TCGACGAAGATCAAGAAAAGGGACTATCAAGGACCTAATGCTAAATCACC
ACCGCCTCTGTTTCATTATTGTGGAGAGGAGAAAGCACTCGACGTTGTGT
TCCCTGACTGGACCTTCTGGGGATGGGCTGAGGTTAGTATAATGCCATGG
GAGCAGATGCTGAGTGCAATAAAGAATGGCAGCAAGAGGACCAAGTGGGA
AGATAGGGTCCCTTATGCCTATTGGAAGGGTAACCCAAATGTTTCTAAAC
AAAGGAAAGACCTTTTGAAATGCAATCGCTCGGATAAATATGACTGGAAT
ACTCATCTTTATATCCAAAATTGGACTAAAGAAAATGAAGAAGGGTTCAA
ACATTCCAAATTGGAAGATCAATGCACCCATAGTATGACCTTGATGATAA
AGCCTGGATACTATGATTTCTTCTCGAGAAACTTGGTGCCAATGCAGCAT
TACTGGCCCATCCGCAGCACAAGCAAATGCAAAGATCTTAAGTTTGCAGT
GGAATGGGGCAATAATCACACTGACAAGGCACAGGCTATTGGGAAGGCAG
GAAGCAAATTAATTGAAGAGTTTCTGACAATGAGAAATATATATGATTAC
ATGTTTCATTTGTTGAACGAATATGCCAAGCTCTTGAAATTTAAACCAAC
AATACCTTTAAAAGCCAAAAGGGTCTGCTCGAAAACCACAGCATGCTCGA
GGGAAGGTGTGTGGAGGGAGTACATGGAGCAGTCCATGGTGAAGTCCCCT
AGCGATAAACTTCCATGCGCATTGCCTCCCCCATATGAACCTCAAGCTCT
TCAAGCTTTTCTCGACAAAAAAGAGAAAACAATTAGGCAAGTGGAGGCAT
GGCAAGCTGAATATTGGAATATTGGAAGGAACTAA
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protein sequence of Tc01v2_p030450.1

>Tc01v2_p030450.1 ID=Tc01v2_p030450.1|Name=Tc01v2_p030450.1|organism=Theobroma cacao|type=polypeptide|length=495bp
MGNDVKVFQGFWRHGDQVCGCFSKIGFGRIKRLVSTTACIIFFFLLLTAA
LVPWIHVPIIQGNPFPQMIFSSRSSIKKHHSRTEYPLNCSDSGLQQKCPN
NYPLVFEPGKLSTETCPDYFRWIHHDLQPWKNSGITKDMIERGKLSAELR
LVIVKGELYMEKSGHPFQTRDLFTIWGILQLLRFYPGKLPDLDLLFYTGD
STKIKKRDYQGPNAKSPPPLFHYCGEEKALDVVFPDWTFWGWAEVSIMPW
EQMLSAIKNGSKRTKWEDRVPYAYWKGNPNVSKQRKDLLKCNRSDKYDWN
THLYIQNWTKENEEGFKHSKLEDQCTHSMTLMIKPGYYDFFSRNLVPMQH
YWPIRSTSKCKDLKFAVEWGNNHTDKAQAIGKAGSKLIEEFLTMRNIYDY
MFHLLNEYAKLLKFKPTIPLKAKRVCSKTTACSREGVWREYMEQSMVKSP
SDKLPCALPPPYEPQALQAFLDKKEKTIRQVEAWQAEYWNIGRN*
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