Tc01v2_t029130.1

Overview
NameTc01v2_t029130.1
Unique NameTc01v2_t029130.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length447
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 26 ESTs, 128 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productubiquitin-conjugating enzyme E2 28
NoteUbiquitin-conjugating enzyme E2 28
Cross References
External references for this mRNA
DatabaseAccession
GeneID18614028
GenbankXM_018113976.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc01v2_g029130Tc01v2_g029130Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc01v2_p029130.1Tc01v2_p029130.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto65623auto65623Theobroma cacaoexon
exon-auto65624auto65624Theobroma cacaoexon
exon-auto65625auto65625Theobroma cacaoexon
exon-auto65626auto65626Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto65627auto65627Theobroma cacaoCDS
CDS-auto65628auto65628Theobroma cacaoCDS
CDS-auto65629auto65629Theobroma cacaoCDS
CDS-auto65630auto65630Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc01v2_t029130.1 ID=Tc01v2_t029130.1|Name=Tc01v2_t029130.1|organism=Theobroma cacao|type=mRNA|length=447bp
ATGGCGTCGAAGCGGATCTTGAAGGAGCTCAAGGATCTCCAGAAAGATCC
TCCCACTTCATGCAGCGCTGGTCCTGTAGCAGAAGACATGTTCCATTGGC
AAGCCACAATAATGGGCCCCCCTGACAGCCCTTATTCTGGAGGTGTCTTT
CTAGTGACAATTCATTTTCCTCCTGATTATCCTTTTAAACCACCTAAGGT
TGCATTTAGAACTAAGGTTTTTCACCCAAATATCAACAGCAATGGTAGTA
TATGCCTTGACATACTAAAGGAGCAGTGGAGTCCAGCCCTGACTATATCT
AAGGTGTTGCTTTCTATCTGCTCCCTCCTGACCGACCCAAACCCTGATGA
TCCCCTGGTGCCGGAAATTGCTCATATGTACAAGACAGACAGGGCCAAGT
ATGAGTCAACTGCAAGGAGCTGGACCCAGAAGTACGCCATGGGCTAG
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protein sequence of Tc01v2_p029130.1

>Tc01v2_p029130.1 ID=Tc01v2_p029130.1|Name=Tc01v2_p029130.1|organism=Theobroma cacao|type=polypeptide|length=149bp
MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYSGGVF
LVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
KVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTARSWTQKYAMG*
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