Tc01v2_t028880.1

Overview
NameTc01v2_t028880.1
Unique NameTc01v2_t028880.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length561
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 22 ESTs, 45 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productabscisic acid receptor PYL9
NoteAbscisic acid receptor PYL9
Cross References
External references for this mRNA
DatabaseAccession
GeneID18613997
GenbankXM_007051517.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc01v2_g028880Tc01v2_g028880Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc01v2_p028880.1Tc01v2_p028880.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto65222auto65222Theobroma cacaoexon
exon-auto65223auto65223Theobroma cacaoexon
exon-auto65224auto65224Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto65225auto65225Theobroma cacaoCDS
CDS-auto65226auto65226Theobroma cacaoCDS
CDS-auto65227auto65227Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc01v2_t028880.1 ID=Tc01v2_t028880.1|Name=Tc01v2_t028880.1|organism=Theobroma cacao|type=mRNA|length=561bp
ATGAACGGCGGTGAGGCGTACAGTATGATGGAGGCGCAGTACGTACGGAG
ACACCACAGGCACGAGATCAGAGACGACCAGTGCACCTCTGCTCTTGTGA
AACACATCAAAGCTCCTGTTCATCTCGTATGGTCATTGGTAAGGCGATTT
GATCAGCCGCAGAAATACAAGCCGTTCGTAAGCAGGTGCATCATGCAAGG
GGACCTCGGAATTGGTAGTGTTAGAGAAGTTAACGTTAAATCCGGCCTTC
CCGCCACCACTAGCACCGAACGATTAGAACTTCTTGATGATGAAGAACAC
ATTCTCGGCATCAAAATCGTCGACGGCGATCACCGCCTTAGGAACTATTC
TTCCATCATAACGGTCCATCCTGAAGTTATTGAAGGAAGGCCAGGGACAA
TGGTGATCGAATCATTCGTTGTGGATGTGCCTGAAGGGAACACCAACGAT
GAAACATGTTACTTTGTGGAGGCTTTAATCCGATGTAATCTGAAATCCTT
AGCCGATGTTTCAGAGAGGATGGCTGTGCTGGACCAGAGAGAGTCTATCA
ACCCATATTAA
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protein sequence of Tc01v2_p028880.1

>Tc01v2_p028880.1 ID=Tc01v2_p028880.1|Name=Tc01v2_p028880.1|organism=Theobroma cacao|type=polypeptide|length=187bp
MNGGEAYSMMEAQYVRRHHRHEIRDDQCTSALVKHIKAPVHLVWSLVRRF
DQPQKYKPFVSRCIMQGDLGIGSVREVNVKSGLPATTSTERLELLDDEEH
ILGIKIVDGDHRLRNYSSIITVHPEVIEGRPGTMVIESFVVDVPEGNTND
ETCYFVEALIRCNLKSLADVSERMAVLDQRESINPY*
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