Tc01v2_t028240.1

Overview
NameTc01v2_t028240.1
Unique NameTc01v2_t028240.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length720
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
ProductATP synthase delta chain, chloroplastic-like
NoteUncharacterized protein
Cross References
External references for this mRNA
DatabaseAccession
GeneID108662484
GenbankXM_018122991.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc01v2_g028240Tc01v2_g028240Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc01v2_p028240.1Tc01v2_p028240.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto64068auto64068Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto64069auto64069Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc01v2_t028240.1 ID=Tc01v2_t028240.1|Name=Tc01v2_t028240.1|organism=Theobroma cacao|type=mRNA|length=720bp
ATGGATGCTCTTTCGAGCTCCGTCTCAACCTTCAAAGTCCCTAACGTTAA
CTCAACATCTCGCGAGTTCCGTCGCTGGAAAACCCCCAACAGACACCGCC
AACTTCCTCCACTGTCTCCACAATGTTCAAATATCTTCTCGAGCGCCAGA
ACCACCACCATCTCCTCCACCAAAACCAACTCTTCTACTCACAAAAACCT
TACGTCTCCATTCTTCTCCACCTCTCAAGCCTCACCTTTCATTTCATCTC
CTTATTATGTCCATTCAAAACCAGCCAGCGGGTACGCCGCAGCCCTTCTA
GACATAGCCCAGTGCAACACTTCACTTGATGCAGTGCAAAAAGATGTTCA
GAAGTTGTCAAAACTGCTCCACCACGGCCATGTCCAAGCTTTCTTGAGTG
ACCCTTTTGTTGGTGACGAAGAGAAGGGAAAAGCAGTGAAGGAACTGGCT
AGAAAAGGGAAGTTCAACAAGCACCTGGTTAGATTGCTAAAGATGCTGAT
CAAGAGGAAGGAGTTGGGGATGGTAAGTGAAGTGTTGGAGGAGTTCGAGA
GGATTTATGATGAGTTGAGTGAGACCAAAGTGGTATGGATTTCGTCAGCG
AAGAAGATAAAGGAAGACAGGTTGTTTAGAATTGCTAAGAGGGTGCAAGA
GCTTAGCGGAGCTGTGAAAGTCAAGATCAGGAATTTGGTTAGAGACAAGT
TACCAGCCGTTGCTGTATAA
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protein sequence of Tc01v2_p028240.1

>Tc01v2_p028240.1 ID=Tc01v2_p028240.1|Name=Tc01v2_p028240.1|organism=Theobroma cacao|type=polypeptide|length=240bp
MDALSSSVSTFKVPNVNSTSREFRRWKTPNRHRQLPPLSPQCSNIFSSAR
TTTISSTKTNSSTHKNLTSPFFSTSQASPFISSPYYVHSKPASGYAAALL
DIAQCNTSLDAVQKDVQKLSKLLHHGHVQAFLSDPFVGDEEKGKAVKELA
RKGKFNKHLVRLLKMLIKRKELGMVSEVLEEFERIYDELSETKVVWISSA
KKIKEDRLFRIAKRVQELSGAVKVKIRNLVRDKLPAVAV*
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