Tc01v2_t028230.1

Overview
NameTc01v2_t028230.1
Unique NameTc01v2_t028230.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length711
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 2 ESTs, 161 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productras-related protein RABA3
NoteRas-related protein RABA3
Cross References
External references for this mRNA
DatabaseAccession
GeneID18613929
GenbankXM_018114448.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc01v2_g028230Tc01v2_g028230Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc01v2_p028230.1Tc01v2_p028230.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto64061auto64061Theobroma cacaoexon
exon-auto64062auto64062Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto64063auto64063Theobroma cacaoCDS
CDS-auto64064auto64064Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc01v2_t028230.1 ID=Tc01v2_t028230.1|Name=Tc01v2_t028230.1|organism=Theobroma cacao|type=mRNA|length=711bp
ATGAACGAAGAGATGAATGGTGTTGACGTCAAGAATCACCAAGAAAATGT
TCCAGAGAAAATAGATTACGTGTTTAAAGTGGTGGTGATCGGCGACTCAG
CTGTTGGCAAGACTCAGATACTCTCCAGGTTTACAAAGAATGAGTTCTGC
TTCGATTCCAAGTCCACCATTGGGGTAGAGTTCCAGACAAGGACTGTTCC
CATTAAGAACAAAGTCATAAAGGCCCAGATCTGGGACACTGCTGGCCAAG
AAAGGTACAGAGCAGTTACAAGCGCATATTATAGAGGTGCCTTGGGGGCA
ATGCTAGTGTATGACATCACCAAGCGACAGAGCTTTGATCACGTGGCGAG
ATGGGTCGAGGAGCTACGCGCCCACGCCGACAATTCCATCGTCATCATGC
TGATTGGAAACAAGGCTGATCTAGTGGACCTCAGGGCGGTTCCAACCGAA
GACGCTGTCGAGTTCGCAGAGGATCAGGGCCTGTTTTTCGCCGAGACGTC
TGCTCTCAGCGGTGACAACGTGGAAAAAGCATTTTTCAAGCTGCTAGAAG
AAATTTATGGTGTGATTTGTAAAAAATCTTTGGGATGTGGAAATGGGAAA
TCCAACGGTGGTGATCGTGCCACTGCGTTAAAAGGATCAAAGATTGAGCT
GATTGCTGGTTCTGATTTAGAAATAAGTGAGATGAAGAAATTATCATCAT
GCACTTGTTAA
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protein sequence of Tc01v2_p028230.1

>Tc01v2_p028230.1 ID=Tc01v2_p028230.1|Name=Tc01v2_p028230.1|organism=Theobroma cacao|type=polypeptide|length=237bp
MNEEMNGVDVKNHQENVPEKIDYVFKVVVIGDSAVGKTQILSRFTKNEFC
FDSKSTIGVEFQTRTVPIKNKVIKAQIWDTAGQERYRAVTSAYYRGALGA
MLVYDITKRQSFDHVARWVEELRAHADNSIVIMLIGNKADLVDLRAVPTE
DAVEFAEDQGLFFAETSALSGDNVEKAFFKLLEEIYGVICKKSLGCGNGK
SNGGDRATALKGSKIELIAGSDLEISEMKKLSSCTC*
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