Tc01v2_t027050.1

Overview
NameTc01v2_t027050.1
Unique NameTc01v2_t027050.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1668
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
Productpectinesterase
NotePutative Probable pectinesterase/pectinesterase inhibitor 21
Cross References
External references for this mRNA
DatabaseAccession
GeneID18613795
GenbankXM_007051208.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc01v2_g027050Tc01v2_g027050Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc01v2_p027050.1Tc01v2_p027050.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto61365auto61365Theobroma cacaoexon
exon-auto61366auto61366Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto61367auto61367Theobroma cacaoCDS
CDS-auto61368auto61368Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc01v2_t027050.1 ID=Tc01v2_t027050.1|Name=Tc01v2_t027050.1|organism=Theobroma cacao|type=mRNA|length=1668bp
ATGATGGGTAAAGTAGTTGTTTCGGGGATTTCCATCATTCTTGTGGTGGG
AGTCGTCATTGGAGTTGTTGCTGTGGTTCATCGCAACGGCGACGATAAGG
CCGACTTGTCTCCACAGATGAAGGCCGTGTCCAACTTCTGTTCATCTACT
GATTATCAAGAAGCCTGCAAGAAGACCCTCAGCTCTGTCAACAGCACTGA
TCCCAAAGATTACGTTGCCCAGGCTATCTTAGCCTCTCAGGAAGCAGTGA
AGAAATTCTTCAACTATTCTGACTCCCTGATCGTTCAGGCCAAGAACGAT
AGCCGAACAAAGATGGCCTTGGATGATTGTAAGGAGATGATGGACTACGC
CATTCAGTCCCTCCAGGCATCGTTCTCCGAGGTGGGTGATGGTGAATTGC
GCAGCATCAATGACCGCATAGCCGATCTCAGGACCTGGTTGAGCGCTGTT
ATCTCATACCAGCAGTCATGCTTGGATGGTTTCGAACCGGAGACCACCAT
GCATCAAACCATGACAACCGGTATTGCTGATGCTAGCGAACTCACAGCCA
ATGCCTTGGCAATTGTGACAAAGTTGTCCGACATTCTTTCCAAATTCGGT
CTCCAGTTGGCTATTCCTACCACCCGTAGGCTTCTTTCTGTTGAGAAGGA
TGGCTATCCCTCATGGTTCTCGGCTGCAGACCGCAAGCTTTTGGCTAGGA
TTGATAACCGCAACTTGAGACCAAATGCTGTTGTGGCTAAGGATGGCAGT
GGCCAGTTCAGGACCATTGCTGCTGCCCTTGCTGCCGCTCCTAAGAATTC
CAAGGTCCGACATGTGATTTATGTCAAGGCTGGAATCTACAACGAGTACA
TCACCGTGGACAAAAAAACTACCAACATCCTCATGTATGGTGACGGCCCA
AGAAAGACCATTGTCACTGGCCACAAGAACTTCGTTGATGGCACATCCAC
CTGGCAGACTGCCACTTTCTCCGCTATTGGAGATGGTTTCATTGCCAAAT
CCATGGGATTCCAAAACACTGCTGGTCCTCAAAAGCACCAGGCCGTGGCT
CTTCGCATCCAATCCGATAAGTCAGCCTTCTTCAACTGCAGAATGGATGG
CTACCAAGACACCTTGTACAATCAAGCCAACCGTCAGTTCTTCCGCAACT
GTGTCATCTCTGGCACCATTGACTTCATCTTCGGTGACTCCCCTACCATT
ATCCAGAACTCACTGATCATCGTCAGGAGGCCAATGGATAATCAACAGAA
CACAGTGACTGCACAGGGCAAGACCAATGCGCATGAGAACACTGGTACCG
TGATCCAGAACTGCAGGATAGTCCCCGAGCAGAAGCTCTTCGCTGACAGG
TTCAAGATCCCAACATACTTGGGCAGGCCGTGGAAGCAATACTCTACAAC
TGTTATCATGGAGTCCACCTTGGGAGACTTCATTCAGCCTGCTGGATGGT
TGCCCTGGGCTGGAAGCAATTTTCTCAACACTCTCTACTATGCTGAGTAC
AACAACCGTGGCCCTGGTGCTAACACCGCTAAGAGGGTTAACTGGAAGGG
TTACCACAGGATTGACAGGCGGACTGCAATGAGATTCACTGTTCAATCCT
TCCTTTTGGGCCGTGAGAATTGGTTGCCCGCCACTGGCATTCCTTTCACA
GCTGGCTTGAGATATTGA
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protein sequence of Tc01v2_p027050.1

>Tc01v2_p027050.1 ID=Tc01v2_p027050.1|Name=Tc01v2_p027050.1|organism=Theobroma cacao|type=polypeptide|length=556bp
MMGKVVVSGISIILVVGVVIGVVAVVHRNGDDKADLSPQMKAVSNFCSST
DYQEACKKTLSSVNSTDPKDYVAQAILASQEAVKKFFNYSDSLIVQAKND
SRTKMALDDCKEMMDYAIQSLQASFSEVGDGELRSINDRIADLRTWLSAV
ISYQQSCLDGFEPETTMHQTMTTGIADASELTANALAIVTKLSDILSKFG
LQLAIPTTRRLLSVEKDGYPSWFSAADRKLLARIDNRNLRPNAVVAKDGS
GQFRTIAAALAAAPKNSKVRHVIYVKAGIYNEYITVDKKTTNILMYGDGP
RKTIVTGHKNFVDGTSTWQTATFSAIGDGFIAKSMGFQNTAGPQKHQAVA
LRIQSDKSAFFNCRMDGYQDTLYNQANRQFFRNCVISGTIDFIFGDSPTI
IQNSLIIVRRPMDNQQNTVTAQGKTNAHENTGTVIQNCRIVPEQKLFADR
FKIPTYLGRPWKQYSTTVIMESTLGDFIQPAGWLPWAGSNFLNTLYYAEY
NNRGPGANTAKRVNWKGYHRIDRRTAMRFTVQSFLLGRENWLPATGIPFT
AGLRY*
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