Tc01v2_t026500.1

Overview
NameTc01v2_t026500.1
Unique NameTc01v2_t026500.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1614
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
Productprobable glycerol-3-phosphate acyltransferase 3
NoteProbable glycerol-3-phosphate acyltransferase 3
Cross References
External references for this mRNA
DatabaseAccession
GeneID18613735
GenbankXM_007051112.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc01v2_g026500Tc01v2_g026500Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc01v2_p026500.1Tc01v2_p026500.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto59810auto59810Theobroma cacaoexon
exon-auto59811auto59811Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto59812auto59812Theobroma cacaoCDS
CDS-auto59813auto59813Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc01v2_t026500.1 ID=Tc01v2_t026500.1|Name=Tc01v2_t026500.1|organism=Theobroma cacao|type=mRNA|length=1614bp
ATGGCTAAACTTTCTATGGAGTTTTCCTTTTTCCAAACCATTTTCTTCTT
ATTCTGTCGAGTTGTCTTTAGACAGTCTAAGAATCACAAATCTCTCCACA
GAAATGTCAGCAATATCCATGCAAACGAGGGTAAATATCATAAGTATCCT
TCTTTTGTTCATAGATCAAACCTGTCAAACCAAACTCTGGTCTTCAGTGT
AGAAGAGGCTTTGTTGAAATCCTCATCATTGTTTCCTTACTTCATGCTTG
TAGCCTTTGAAGCTGGAGGGCTCTTGAGGGCTTTTATTCTTTTTGTTTTA
TACCCAATTCTATGCTTAGTTAGCGAAGAGATGGGGTTGAAGATAATGGT
CCTGGTTTGCTTCTTTGGGATAAAGAAAAAGAGCTTCAGAGTTGGAAGTG
CTGTTCTGCCGAAGTTCTTCTTGGAGGATGTTGGCTTGGAACCATTTGAG
ATGTTGAAGAAAGGCGGGAAAAAGGTGGCTGTCAGTAAAATTCCTCAAGT
GATGATCGAGAGTTTCTTGAAGGATTACCTGGAAATTGATTTTGTAGTTG
GAAGAGAGCTGAAGGAGTTCTGTGGGTACTTTTTGGGAGTCATGGAAGAG
AAGAAGAGAAGTAAGGCTGCTTTGGACGAGATAATAGGAAGCGAAAGTAT
GGGCTTTGATGTTATTGGCATCAGTGGCCTCGAGAAATCTCTTGACTATC
ATTTTTTTTCTCATTGCAAGGAAATATACCAGGTGAGAAAAGCAGACAAA
AGAAACTGGCGACACGTCCCAAGACAGGAGTATTCCAAACCACTCATTTT
CCATGACGGGAGACTAGCTCTCAGGCCAACTCTGGTGGCCTCCCTGACCA
TGTTCGTGTGGTTCCCCTTCGGCTTGGCTCTTTCCATACTCAGAGCTGTT
GTCGGCTTAATGCTTCCGTACAAGATTTCCATCCCCCTATTAGCCTACAG
CGGGTTGCACCTGTTTCTTTCAACCCCGGAAAGCTCCCTGCATCCTCTTT
CACTTCCGAACTCGAAGAAACATAACCCAAAAGGCCGCCTTTATGTTTGC
AATCATAGAACACTGCTGGATCCCGTCTACCTTTCTTTTGCATTACAGAA
AGACCTCACTGTTGTTACTTACAGCTTAAGCAGGATATCAGAGCTGTTAG
CTCCAATCAAAACCGTTCGATTAGCAAGGGATCGTGATCAAGATGGTAAA
ATGATGGAAAAGATGCTAAATTTAGGGGACCTAGTCGTATGCCCGGAAGG
GACTACGTGTAGGGAGCCCTATCTCTTAAGGTTCAGCCCTTTATTTTCAG
AGATGAGCGACGATATAGTCCCTGTTGCGATGGACAGCAATGTGAGTTTG
TTCTATGGGACAACAGCCAGTGGCCTGAAATGTCTGGACCCACTTTTCTT
TCTCATGAACCCACGACCAATCTACACTGTCCGGATACTTGATGGTGTAT
CTGGCTGGTACACTTGTCATGATGGTCAAAGATCAAGGTTTAAAGTGGCT
AATCAGGTTCAGAATGAGATTGGTAAGGCTCTGGGTTTTGAGTGCACCAA
GCTTACGAGAAGAGACAAGTACCTAATCATGGCTGGCAACGAAGGAATAA
TTAGCCAAACCTAA
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protein sequence of Tc01v2_p026500.1

>Tc01v2_p026500.1 ID=Tc01v2_p026500.1|Name=Tc01v2_p026500.1|organism=Theobroma cacao|type=polypeptide|length=538bp
MAKLSMEFSFFQTIFFLFCRVVFRQSKNHKSLHRNVSNIHANEGKYHKYP
SFVHRSNLSNQTLVFSVEEALLKSSSLFPYFMLVAFEAGGLLRAFILFVL
YPILCLVSEEMGLKIMVLVCFFGIKKKSFRVGSAVLPKFFLEDVGLEPFE
MLKKGGKKVAVSKIPQVMIESFLKDYLEIDFVVGRELKEFCGYFLGVMEE
KKRSKAALDEIIGSESMGFDVIGISGLEKSLDYHFFSHCKEIYQVRKADK
RNWRHVPRQEYSKPLIFHDGRLALRPTLVASLTMFVWFPFGLALSILRAV
VGLMLPYKISIPLLAYSGLHLFLSTPESSLHPLSLPNSKKHNPKGRLYVC
NHRTLLDPVYLSFALQKDLTVVTYSLSRISELLAPIKTVRLARDRDQDGK
MMEKMLNLGDLVVCPEGTTCREPYLLRFSPLFSEMSDDIVPVAMDSNVSL
FYGTTASGLKCLDPLFFLMNPRPIYTVRILDGVSGWYTCHDGQRSRFKVA
NQVQNEIGKALGFECTKLTRRDKYLIMAGNEGIISQT*
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