Tc01v2_t025660.1

Overview
NameTc01v2_t025660.1
Unique NameTc01v2_t025660.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length978
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 3 Proteins, and 58% coverage of the annotated genomic feature by RNAseq alignments
Producttwo-component response regulator ARR1
NotePutative Two-component response regulator ARR1
Cross References
External references for this mRNA
DatabaseAccession
GeneID18613636
GenbankXM_018118212.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc01v2_g025660Tc01v2_g025660Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc01v2_p025660.1Tc01v2_p025660.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto57370auto57370Theobroma cacaoexon
exon-auto57371auto57371Theobroma cacaoexon
exon-auto57372auto57372Theobroma cacaoexon
exon-auto57373auto57373Theobroma cacaoexon
exon-auto57374auto57374Theobroma cacaoexon
exon-auto57375auto57375Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto57376auto57376Theobroma cacaoCDS
CDS-auto57377auto57377Theobroma cacaoCDS
CDS-auto57378auto57378Theobroma cacaoCDS
CDS-auto57379auto57379Theobroma cacaoCDS
CDS-auto57380auto57380Theobroma cacaoCDS
CDS-auto57381auto57381Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc01v2_t025660.1 ID=Tc01v2_t025660.1|Name=Tc01v2_t025660.1|organism=Theobroma cacao|type=mRNA|length=978bp
ATGGATGAACAGAATATTCAAATATCCCTTTTGAAGAACGGTTGTGCAGA
TAAAGTTAACAACAGTGTTGTTGGTGAATTTCCGGCTGGTTTGAAGATTC
TCATAGTTGATGATTCTAGAACATGTCTCCTAGTATTAGAGATAATGCTT
CGAAAGCTTTTATATGAAGTTACCACGTGTCGGCTAGCGAAGGATGCCCT
TGCTTTGCTTCGAGAAGACAATGAAAGATTTGATATCGTCATATGCGATT
TACATATGCCTGAAATGGATGGACTTAAGCTTCTTGATATCATAGGATTA
GAAATGGACTTGCCGGTTGTTATGATGTCTGCAGATGATAAAAGAGGAGT
TATTATGAAGGGTATAATCCATGGAGCTTGTGATTATTTGGTAAAACCAG
TTCGCTTAGACTCGATTAGATTCATATGGCAGCATGTGGTTCGTAGGAAA
AGACGTAGCTTGGGAGAGTTTCAGCAGCCAGGGAACAATGTCAATGACAG
GTTATTGAAATTAGAACAAGCTAAGGATGCTGATCAAATGCCCGCGAGAG
ATAAAGGAAGCCTGCAAAGCTTGAAACGGACAAGGGAAGATGAAGATGAA
GATGAAGATGATGGAGAATTCTCTGATGAAGTGACAACTACGAAGAAGCC
GAGGATGATTTGGACCCAAGAGCTCCATGATATGTTCGTTGCTGCTGTAA
ATCAACTAGGACGTGACAAGGCTGTTCCTAAGAAAATTTTGGAGCGTATG
CAAGCCATGAATGTTACTGGTCTTACAAGAGCAAATATTGCCAGTCATCT
TCAGAAGTACCGGATGCATCTTCAAAAGGTAGGTGAACCCTCGACTGAGA
ACAGAGATCTCAATGCTTTTTTTGAGCAAGCTTCTTCAATTCACCAGCGC
AACCTACAAGCACAACCCACTGTCGCTTCATGCCATCAACTTCCACTGCA
AAATCTCATGGCTCCACAGTCCAAATGA
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protein sequence of Tc01v2_p025660.1

>Tc01v2_p025660.1 ID=Tc01v2_p025660.1|Name=Tc01v2_p025660.1|organism=Theobroma cacao|type=polypeptide|length=326bp
MDEQNIQISLLKNGCADKVNNSVVGEFPAGLKILIVDDSRTCLLVLEIML
RKLLYEVTTCRLAKDALALLREDNERFDIVICDLHMPEMDGLKLLDIIGL
EMDLPVVMMSADDKRGVIMKGIIHGACDYLVKPVRLDSIRFIWQHVVRRK
RRSLGEFQQPGNNVNDRLLKLEQAKDADQMPARDKGSLQSLKRTREDEDE
DEDDGEFSDEVTTTKKPRMIWTQELHDMFVAAVNQLGRDKAVPKKILERM
QAMNVTGLTRANIASHLQKYRMHLQKVGEPSTENRDLNAFFEQASSIHQR
NLQAQPTVASCHQLPLQNLMAPQSK*
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