Tc01v2_t025520.1

Overview
NameTc01v2_t025520.1
Unique NameTc01v2_t025520.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length534
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Productuncharacterized LOC18613617
NoteUncharacterized protein isoform 1
Cross References
External references for this mRNA
DatabaseAccession
GeneID18613617
GenbankXM_018121023.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc01v2_g025520Tc01v2_g025520Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc01v2_p025520.1Tc01v2_p025520.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto57072auto57072Theobroma cacaoexon
exon-auto57073auto57073Theobroma cacaoexon
exon-auto57074auto57074Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto57075auto57075Theobroma cacaoCDS
CDS-auto57076auto57076Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc01v2_t025520.1 ID=Tc01v2_t025520.1|Name=Tc01v2_t025520.1|organism=Theobroma cacao|type=mRNA|length=534bp
ATGAAGAAGATGACATGCAAAGAGATGAAGATGAAAAAGATGACATGGAA
GGAGATGAAGATGAAGATGAAGATCAAATTGAAGATGACAATTGTGAAAC
TTTTAATGATGATAGTGATAATAATGAAGAACATGAGTTTGCTTATTCTG
AAAGTGATTGATGATGGAGCGATGGTTAAAGGGAAGCATTCAAAACCGAG
ACCTAGATCAACAAATGCCCTTGGAAGTATCTCTTTGCCTACAAATGCCA
GTACGTTAGCTGATATATCTATTCAACAACAAATGCAGCAGGACTATAAT
GATGTGCCATCTAAGACACCTTCTTTGTTGGGTGCATCTGCAGAGCAAGT
TCACAATGAGACATCTACTCATGATTCTCGTAAATTCCCATCTACTGATT
TAGGTGCAAGTGTAGATGACACATCTTCAAGGCCAAGGGGTCAAGAGCTG
AGTGTGGGATTACGTACTCCTGTAGATCCATCCAACAGATTACGTATAAC
TCTTATTGGGGAGAAGTATGTTATCTTGTTATAA
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protein sequence of Tc01v2_p025520.1

>Tc01v2_p025520.1 ID=Tc01v2_p025520.1|Name=Tc01v2_p025520.1|organism=Theobroma cacao|type=polypeptide|length=178bp
MKKMTCKEMKMKKMTWKEMKMKMKIKLKMTIVKLLMMIVIIMKNMSLLIL
KVIDDGAMVKGKHSKPRPRSTNALGSISLPTNASTLADISIQQQMQQDYN
DVPSKTPSLLGASAEQVHNETSTHDSRKFPSTDLGASVDDTSSRPRGQEL
SVGLRTPVDPSNRLRITLIGEKYVILL*
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