|
Properties
Property Name | Value |
Product | methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial, transcript variant X1 |
Model evidence | Supporting evidence includes similarity to: 3 ESTs, 35 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns |
Note | Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc01v2_t022730.1 ID=Tc01v2_t022730.1|Name=Tc01v2_t022730.1|organism=Theobroma cacao|type=mRNA|length=3390bp ATGTCGTTAATGGCTTTAATCCTCCGCCGAAAGCTTCTTCACCACCCCAC GCCCGTCCTTCTCCAACTAAGATTGCTCTCTTCCTCTACTTCTCACCTCG AAACGCCTCCGCAGCGCATTGAGAAAATTCTAGTGGCGAACCGAGGTGAG ATAGCATGCAGAATCATGAGGACAGCTAAGCGTCTAGGGATTCGGACCGT GGCGGTTTACAGCGACGCCGATAAAGACTCTCTCCACGTGAAATCGGCGG ACGAGGCGGTCCACATCGGTCCACCCCCCGCTCGGCTCAGTTACTTAAAC GGCTCTTCCATTGTCGAGGCCGCAATTCGCAGTGGAGCACAGGCTATCCA TCCCGGTTATGGTTTCTTATCGGAGAGCTCTGAGTTTGCTGGACTTGTTG AAGATAAGGGACTTACATTTATTGGTCCTCCAACGTCTGCAATCCGAGAC ATGGGTGACAAAAGTGCCTCAAAGAGAATAATGGGTGCGGCAGGGGTGCC ATTGGTGCCGGGGTATCATGGCAGTGAACAAGATATAGAAATTATGAAGT TGGAAGCAGATAAAATTGGATATCCTATCTTAATAAAGCCAACTCACGGA GGTGGAGGAAAGGGCATGAGAATTGTACATAGTCAGAAGGATTTCATTGA CTCCTTTTTGGGAGCACAACGGGAAGCTGCTGCGTCTTTTGGCATAAACA CAATTTTGCTGGAGAAATACATTACACAACCAAGACACATTGAAGTCCAG ATATTTGGTGACAAATATGGAAATGTTCTGCATTTATATGAGAGAGATTG CAGTGTGCAAAGGAGACACCAGAAGATAATTGAAGAAGCTCCAGCTCCAT GTGTTACTGATGAATTTCGCTCACACTTGGGTCAGGCTGCTGTATCTGCT GCGAAGGCAGTTGGTTATCACAATGCTGGCACTGTGGAGTTTATAGTTGA TACCATAACAGGTCAATTTTACTTTATGGAGATGAACACCCGACTTCAGG TTGAGCATCCTGTGACTGAGATGATTGTTGGTCAAGATCTTGTGGAGTGG CAAATTCGTGTTGCAAATGGGGAGCCTCTTCCTATAAGTCAGGTGCAGGT GCCCTTATCAGGTCACTCTTTTGAAGCCCGAATCTATGCTGAAAATGTTC CCAAAGGATTTCTTCCTGCAACTGGAGTTCTTCATCATTATCATCCTGTG CCGGTTTCATCAACAGTTCGGGTTGAGACTGGAGTTGAACAAGGAGATGT TGTTAGCATGCATTATGATCCTATGATCGCAAAGCTTGTAGTATGGGGAG AAAACCGTTCTGCAGCACTAGTGAAATTGAAGGATTGTTTGTCAAAGTTT CAGGTTGCAGGGGTGCCTACTAATATCAATTTCTTGCAAAAACTTGCTAA CCATAGGGCATTTGAAGAGGGTGATGTAGAAACACATTTTATTGAGCACC ATAAAGATGACCTATTTGTTGATCCTAATAATAAAGAAATTTCTGAGGAA GCATATGATGCAGCTAGACTCAGTGCAAATCTGGTAGCTGCATGCCTTTG TGAAGAGGAACATTCTACTTTAAAAGAAAGCCACCCCGGGGGTCCAAGCT TACTTTCTATATGGTATGCTCATTCTCCGTTCAGAGTCAATCATCATGCT CAGAGTACCATGGAACTTGAGTGGGAAAATGAATATGATAGCAGTAGCTC AAAGCCTTTAATGCTTGCCATAACTTATCAGCGAGATGGGAACTATCTTA TTCAGCATATACAGATCGGAGAAAACAGTGCCCATAGTTTGGAAGTCAGA GCATCACATCTGGGCAACAATAGTTTTAGAGTTGAGGCTGATGGGGTAAC CATGCATGTTAGTTTGGCTGTTTATATTAAGGATAAGATGAAACACATAC ATATATGGCATGGACCACACCACCATCATTTTAGACAGAAACTGGGCCTT GAGTTGTCTGATGAAGATGAAACACAGCATAAGACCAGTTTTGAGACCAC AAGCCACCCTCCTGGAACCGTGGTGGCACCCATGGCTGGTTTAGTTGTCA AGGTTCTGGTGGAGGATGGAGCAAAGGTGGAAGAAGGACAACCTGTATTG GTCCTAGAAGCAATGAAGATGGAGCATGTGGTAAAGGCAACATCTGGTGG TTATGTTCAAGGACTCAAAGTCACAGCTGGTCAACAGGTTTCAGATGGTA GTGTTCTCTTCAGAGTCAAGATGGCTACAAGCAATGGTGAGGGAGCTGAA GTTGTTGGAAAAACAGAGAAATCCGGAACAGAGGAGAAGGCCTTGGGGTC TATTGGAAATCTTAGCAACAAGGACATGTTTCAAAGAGCAGATAAGATAG ATTTCAAGAGCTGGGATTTGCATCTTGATAAGCACTTGAGCAGGGCTTGG TCTAGGGACGACAGAGATATTTCAACTAAGACAAAGAAGGAAGAGTGGGA AATTGATTTGGCTAAACTTGATATAAGGCATGTTATAGCTCATGGGACTT ATGGCACCGTTTACCGTGGCGTTTATGATAGCCAAGATGTTGCAGTGAAG GTATTGGATTGGGGGGAGGATGGGATTGCCACAGCTGCTGAAGCAGCTGC TCTTCGGGCATCATTCCGGCAAGAGGTTGCTGTTTGGCATAAGCTTGACC ATCCAAATGTTACAAAGTTTATTGGAGCTTCAATGGGAACTTCCAACCTT AAGATCCCAACCAAAGGTGCAACAACTGAGAATAACAATTCTCTTCCTTC CAGAGCATGTTGTGTTGTTGTTGAGTACCTTCCAGGTGGGACGTTAAAGA ATTTTTTGATCAGAAACAGGAGGAAGAAACTGGCCTTTAAGGTTGTGATT CAAATTGCTTTGGATCTCTCTAGAGGTTTGAGCTATCTTCACTCCAAAAA GATAGTACACCGTGATGTCAAGACAGAAAATATGTTGCTAGATCCTCGTA GAACTTTGAAAATTGCTGATTTTGGTGTTGCTCGAGTTGAAGCTCAGAAC CCAAGAGACATGACTGGAGAAACAGGCACTCTTGGTTACATGGCTCCAGA GGTCCTTGATGGGAAGCCTTACAATAGAAAATGTGATGTCTACAGCTTTG GTATATGCTTGTGGGAAATATACTGCTGTGACATGCCTTATGCTGATCTT AGTTTCGCTGAAGTTTCATCAGCAGTAGTACGACAGAATTTACGGCCAGA AATTCCTAGATGTTGCCCAAGTTCATTGGCAAGCATCATGCGAAAATGTT GGGATGCACATCCTGAAAGACGTCCTGACATGGATGAGGTAGTGAGATTG CTAGAAGCAGTAGATACAAGCAAAGGAGGTGGCATGATACCTGATGACCA AGCTCCTGGCTGTTTCTGTTTCACTGCTCGTGGCCCATGA back to topprotein sequence of Tc01v2_p022730.1 >Tc01v2_p022730.1 ID=Tc01v2_p022730.1|Name=Tc01v2_p022730.1|organism=Theobroma cacao|type=polypeptide|length=1130bp
MSLMALILRRKLLHHPTPVLLQLRLLSSSTSHLETPPQRIEKILVANRGE IACRIMRTAKRLGIRTVAVYSDADKDSLHVKSADEAVHIGPPPARLSYLN GSSIVEAAIRSGAQAIHPGYGFLSESSEFAGLVEDKGLTFIGPPTSAIRD MGDKSASKRIMGAAGVPLVPGYHGSEQDIEIMKLEADKIGYPILIKPTHG GGGKGMRIVHSQKDFIDSFLGAQREAAASFGINTILLEKYITQPRHIEVQ IFGDKYGNVLHLYERDCSVQRRHQKIIEEAPAPCVTDEFRSHLGQAAVSA AKAVGYHNAGTVEFIVDTITGQFYFMEMNTRLQVEHPVTEMIVGQDLVEW QIRVANGEPLPISQVQVPLSGHSFEARIYAENVPKGFLPATGVLHHYHPV PVSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRSAALVKLKDCLSKF QVAGVPTNINFLQKLANHRAFEEGDVETHFIEHHKDDLFVDPNNKEISEE AYDAARLSANLVAACLCEEEHSTLKESHPGGPSLLSIWYAHSPFRVNHHA QSTMELEWENEYDSSSSKPLMLAITYQRDGNYLIQHIQIGENSAHSLEVR ASHLGNNSFRVEADGVTMHVSLAVYIKDKMKHIHIWHGPHHHHFRQKLGL ELSDEDETQHKTSFETTSHPPGTVVAPMAGLVVKVLVEDGAKVEEGQPVL VLEAMKMEHVVKATSGGYVQGLKVTAGQQVSDGSVLFRVKMATSNGEGAE VVGKTEKSGTEEKALGSIGNLSNKDMFQRADKIDFKSWDLHLDKHLSRAW SRDDRDISTKTKKEEWEIDLAKLDIRHVIAHGTYGTVYRGVYDSQDVAVK VLDWGEDGIATAAEAAALRASFRQEVAVWHKLDHPNVTKFIGASMGTSNL KIPTKGATTENNNSLPSRACCVVVEYLPGGTLKNFLIRNRRKKLAFKVVI QIALDLSRGLSYLHSKKIVHRDVKTENMLLDPRRTLKIADFGVARVEAQN PRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMPYADL SFAEVSSAVVRQNLRPEIPRCCPSSLASIMRKCWDAHPERRPDMDEVVRL LEAVDTSKGGGMIPDDQAPGCFCFTARGP* back to top
|