Tc01v2_t022380.1

Overview
NameTc01v2_t022380.1
Unique NameTc01v2_t022380.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1731
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
Productpyruvate kinase isozyme A, chloroplastic
NotePyruvate kinase isozyme A, chloroplastic
Cross References
External references for this mRNA
DatabaseAccession
GeneID18613252
GenbankXM_007050386.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc01v2_g022380Tc01v2_g022380Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc01v2_p022380.1Tc01v2_p022380.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto49805auto49805Theobroma cacaoexon
exon-auto49806auto49806Theobroma cacaoexon
exon-auto49807auto49807Theobroma cacaoexon
exon-auto49808auto49808Theobroma cacaoexon
exon-auto49809auto49809Theobroma cacaoexon
exon-auto49810auto49810Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto49811auto49811Theobroma cacaoCDS
CDS-auto49812auto49812Theobroma cacaoCDS
CDS-auto49813auto49813Theobroma cacaoCDS
CDS-auto49814auto49814Theobroma cacaoCDS
CDS-auto49815auto49815Theobroma cacaoCDS
CDS-auto49816auto49816Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc01v2_t022380.1 ID=Tc01v2_t022380.1|Name=Tc01v2_t022380.1|organism=Theobroma cacao|type=mRNA|length=1731bp
ATGTCTGAGTCCTTCCGCTTCTCGACTTCCTTATCTCCGTTACAGTCTCC
TGAATTCCCTAGAATGCCCTGTCTTAAACCCCGCATTCACGTGCCGAACC
ACGTGCCAGTTTTAAAGCCAATGACGGCAGCGAATTCGAGGTTTCTTTTA
CCCGAAAAACTGAAAGTCACGGCTTCTGAGATGCCGATAACGGCGGCGGC
TCCGGTTTCGATGATGGAATCGGAGGGATTAGAAGTGGACAGGGTGACGG
AGGCGGAGCTGAAAGAGAACGGGTTCAGGAGCACACGTCGGACCAAGATC
ATATGCACCATCGGGCCTCGCACGTGCGAGTTTGAACAGATTGAGGGTCT
GGCTGTGGGAGGAATGAACGTGGCGCGTGTCAATATGTGCCACGGCAGGC
GCGAGTGGCACCGAGACGTGATCCGGCGGGTGAGGCATTTAAATGAAGAG
AAAGGGTTCGCCGTGGCAGTTATGATGGACACGGAAGGGAGCGAGATTCA
CATGGATGATCTAAACGGCGCCCAATCGGCCAAAGCCGAGGATGGTGAAA
TATGGACTTTTACCGTGCGAGCATTTGATCCGACATCGTGCCCCAAACGT
ACCATTACTGTTAACTATGATGGCTTTGCTGAAGATGTGAAGGTTGGTGA
TGAGCTGCTTGTTGATGGAGGAATGGTGAGGTTTGTGGTGACTCAGAAGA
TTGGTCCAGATGTAATCTGCCACTGTACAGATCCAGGGCTGTTATTACCT
CGTGCTAATCTTACTTTTTGGAGAAATGGGAGTCTGGTTCAAGAGCGTAA
TGCCATGCTTCCTACAATATCTTCAAAGGATTGGCTGGATATTGATTTTG
GAATTGCCGAGGGTGTTGATTTTATTGCAGTATCCTTTGTGAAGTCTGCT
GAAGTCATTAAGACTCTAAAGAGTTATATCACTGCACGATCACCTGAAAG
CCAAATTGCTGTCATTGCTAAGATTGAGAGTATTGACTCTTTAGAAAATT
TGGAAGAGATTATTCAGGCGTCAGATGGAGCTATGGTGGCCAGAGGAGAT
CTAGGTGCACAGATACCATTGGAACAGGTCCCATCAGTTCAACAGAAAGT
TGTGCAGCTGTGCAGGCAATTAAATAAGCCTGTCATTGTTGCCTCCCAGC
TGCTTGAATCCATGATCGAATATCCTATACCAACCAGAGCGGAAGTTGCT
GATGTTTCTGAAGCAGTAGGGCAGCAGGCAGATGCTCTAATGCTTTCCAG
TGAATCAGCCATGGGTCAATACCCTGAGAAAGCATTAGCTGTGCTAAGAA
GTGTCAGTTTGAGAATTGAGAGGTGGCGGAGGGAGGAGAAGCAGTGTGAT
ACCACCGACCTTCCAATTGTGTCAGCTTCCATGCCTGCTAGCATTTCTGA
GGAGATATGCAATACAGCTTCGAGTATGGCTAACAAACTGAAAGCAGATG
CCATTTTTGTTTACACAAAAACTGGGCAGACAGCATCTTTTCTTTCCCGC
AATCGGCCTGACTGTCCAATCTTTGCATTTACACCCACAACATCCATCCG
AAGGTGCTTGAACCTGCAGTGGGGCTTGATTCCTTTCCGCCTTAATTTCT
CAGATGATATGGAGAGCAATCTAAACAGAACCTTCTCCTTGCTCAAAGCA
AGAGGCATGATCAACTCAGGTGACCTTATCATTGTTGTCTCTGATGTTCT
GCAATCCATCCAAGCAATCAAGGTTCCCTAA
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protein sequence of Tc01v2_p022380.1

>Tc01v2_p022380.1 ID=Tc01v2_p022380.1|Name=Tc01v2_p022380.1|organism=Theobroma cacao|type=polypeptide|length=577bp
MSESFRFSTSLSPLQSPEFPRMPCLKPRIHVPNHVPVLKPMTAANSRFLL
PEKLKVTASEMPITAAAPVSMMESEGLEVDRVTEAELKENGFRSTRRTKI
ICTIGPRTCEFEQIEGLAVGGMNVARVNMCHGRREWHRDVIRRVRHLNEE
KGFAVAVMMDTEGSEIHMDDLNGAQSAKAEDGEIWTFTVRAFDPTSCPKR
TITVNYDGFAEDVKVGDELLVDGGMVRFVVTQKIGPDVICHCTDPGLLLP
RANLTFWRNGSLVQERNAMLPTISSKDWLDIDFGIAEGVDFIAVSFVKSA
EVIKTLKSYITARSPESQIAVIAKIESIDSLENLEEIIQASDGAMVARGD
LGAQIPLEQVPSVQQKVVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVA
DVSEAVGQQADALMLSSESAMGQYPEKALAVLRSVSLRIERWRREEKQCD
TTDLPIVSASMPASISEEICNTASSMANKLKADAIFVYTKTGQTASFLSR
NRPDCPIFAFTPTTSIRRCLNLQWGLIPFRLNFSDDMESNLNRTFSLLKA
RGMINSGDLIIVVSDVLQSIQAIKVP*
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