Tc01v2_t018360.1

Overview
NameTc01v2_t018360.1
Unique NameTc01v2_t018360.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1128
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 14 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productoleoyl-acyl carrier protein thioesterase 1, chloroplastic
NoteOleoyl-acyl carrier protein thioesterase 1, chloroplastic
Cross References
External references for this mRNA
DatabaseAccession
GeneID18612736
GenbankXM_007049650.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc01v2_g018360Tc01v2_g018360Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc01v2_p018360.1Tc01v2_p018360.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto41485auto41485Theobroma cacaoexon
exon-auto41486auto41486Theobroma cacaoexon
exon-auto41487auto41487Theobroma cacaoexon
exon-auto41488auto41488Theobroma cacaoexon
exon-auto41489auto41489Theobroma cacaoexon
exon-auto41490auto41490Theobroma cacaoexon
exon-auto41491auto41491Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto41492auto41492Theobroma cacaoCDS
CDS-auto41493auto41493Theobroma cacaoCDS
CDS-auto41494auto41494Theobroma cacaoCDS
CDS-auto41495auto41495Theobroma cacaoCDS
CDS-auto41496auto41496Theobroma cacaoCDS
CDS-auto41497auto41497Theobroma cacaoCDS
CDS-auto41498auto41498Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc01v2_t018360.1 ID=Tc01v2_t018360.1|Name=Tc01v2_t018360.1|organism=Theobroma cacao|type=mRNA|length=1128bp
ATGTTGAAGCTTTCTTCCTGCAATGTGACGGACCAAAGACAGGCCTTGGC
CCAATGCAGATTCCTCGCTCCGCCTGCTCCGTTCTCCTTTCGCTGGCGTA
CCCCAGTCGTCGTCTCCTGCTCTCCTTCCAGCAGACCTAACCTGTCGCCT
CTTCAAGTTGTCCTGTCTGGCCAGCAGCAAGCTGGGATGGAGCTGGTCGA
ATCCGGGTCGGGGAGTTTGGCTGACCGGCTCCGGTTGGGTAGCTTGACGG
AAGATGGTTTGTCCTATAAGGAGAAGTTTATTGTGAGGTGTTATGAGGTG
GGAATTAACAAAACTGCCACTGTTGAAACCATTGCCAATCTCTTGCAGGA
GGTTGGATGTAACCATGCTCAAAGTGTTGGATATTCCACAGATGGGTTTG
CTACCACTCGCACCATGAGAAAATTGCATCTCATTTGGGTAACTGCACGC
ATGCACATTGAAATATACAAATACCCTGCTTGGAGTGATGTGATTGAAAT
AGAGACATGGTGCCAAAGTGAGGGAAGAATTGGAACCAGAAGGGACTGGA
TTCTTAAGGACTTTGGAACTGGTGAAGTTATTGGAAGAGCTACTAGCAAG
TGGGTGATGATGAACCAGGACACTAGGCGGCTACAGAAAGTCAGTGATGA
TGTCAGGGAAGAATATTTAGTCTTCTGTCCACGAGAACTCAGATTAGCAT
TTCCAGAGGAGAACAATAATAGTTTGAAGAAAATTGCCAAATTAGATGAC
TCTTTTCAGTATTCCAGGCTAGGGCTTATGCCAAGAAGAGCTGATCTGGA
CATGAACCAGCATGTCAATAATGTCACCTACATTGGATGGGTTCTGGAGA
GCATGCCTCAAGAGATCATTGACACCCATGAACTGCAAACTATCACGTTA
GATTACAGACGGGAATGCCAACAGGATGACGTGGTGGATTCACTTACCAG
TCCAGAACAAGTGGAGGGTACCGAAAAAGTTTCAGCGATTCACGGAACAA
ATGGGTCTGCAGCTGCAAGAGAAGATAAGCAGGACTGCCGTCAGTTTTTG
CATCTGTTGAGATTGTCTAGTGATGGACAGGAAATAAATCGAGGCCGTAC
TGAGTGGAGAAAGAAACCTGCGAGATGA
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protein sequence of Tc01v2_p018360.1

>Tc01v2_p018360.1 ID=Tc01v2_p018360.1|Name=Tc01v2_p018360.1|organism=Theobroma cacao|type=polypeptide|length=376bp
MLKLSSCNVTDQRQALAQCRFLAPPAPFSFRWRTPVVVSCSPSSRPNLSP
LQVVLSGQQQAGMELVESGSGSLADRLRLGSLTEDGLSYKEKFIVRCYEV
GINKTATVETIANLLQEVGCNHAQSVGYSTDGFATTRTMRKLHLIWVTAR
MHIEIYKYPAWSDVIEIETWCQSEGRIGTRRDWILKDFGTGEVIGRATSK
WVMMNQDTRRLQKVSDDVREEYLVFCPRELRLAFPEENNNSLKKIAKLDD
SFQYSRLGLMPRRADLDMNQHVNNVTYIGWVLESMPQEIIDTHELQTITL
DYRRECQQDDVVDSLTSPEQVEGTEKVSAIHGTNGSAAAREDKQDCRQFL
HLLRLSSDGQEINRGRTEWRKKPAR*
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