Tc01v2_t018340.3

Overview
NameTc01v2_t018340.3
Unique NameTc01v2_t018340.3
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length270
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 1 EST, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productdolichol-phosphate mannosyltransferase subunit 3, transcript variant X1
NoteDolichol-phosphate mannosyltransferase-related
Cross References
External references for this mRNA
DatabaseAccession
GeneID18612731
GenbankXM_007049645.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc01v2_g018340Tc01v2_g018340Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc01v2_p018340.3Tc01v2_p018340.3Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto41468auto41468Theobroma cacaoexon
exon-auto41469auto41469Theobroma cacaoexon
exon-auto41470auto41470Theobroma cacaoexon
exon-auto41471auto41471Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto41472auto41472Theobroma cacaoCDS
CDS-auto41473auto41473Theobroma cacaoCDS
CDS-auto41474auto41474Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc01v2_t018340.3 ID=Tc01v2_t018340.3|Name=Tc01v2_t018340.3|organism=Theobroma cacao|type=mRNA|length=270bp
ATGAAGCATGTTGTGAAGATTTTCTCTCTGCTGGTGGCCATCTCTGGACT
TTGGATCGGCCTATTGCAGGCATCCATAATATCACAAAGTCATACTTGGT
TGCTGCCTATCTATTCTATTGTGTCACTTGGATGCTATGGTTTATTAATG
GTTGGAGTTGGTCTAATGCGATTCCCAACTTGTCCCCAAGAAGCATTGCT
GCTGCAGCAGGATATTGCCGAGGCCAAGGACTTTCTGAATCAAAAGGGGG
TTGATGTTGGTTTTGCATGA
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protein sequence of Tc01v2_p018340.3

>Tc01v2_p018340.3 ID=Tc01v2_p018340.3|Name=Tc01v2_p018340.3|organism=Theobroma cacao|type=polypeptide|length=90bp
MKHVVKIFSLLVAISGLWIGLLQASIISQSHTWLLPIYSIVSLGCYGLLM
VGVGLMRFPTCPQEALLLQQDIAEAKDFLNQKGVDVGFA*
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