Tc01v2_t018230.1

Overview
NameTc01v2_t018230.1
Unique NameTc01v2_t018230.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1584
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
Productcytochrome P450 CYP82D47
NotePutative Cytochrome P450 82C2
Cross References
External references for this mRNA
DatabaseAccession
GeneID18612716
GenbankXM_018114394.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc01v2_g018230Tc01v2_g018230Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc01v2_p018230.1Tc01v2_p018230.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto41239auto41239Theobroma cacaoexon
exon-auto41240auto41240Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto41241auto41241Theobroma cacaoCDS
CDS-auto41242auto41242Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc01v2_t018230.1 ID=Tc01v2_t018230.1|Name=Tc01v2_t018230.1|organism=Theobroma cacao|type=mRNA|length=1584bp
ATGGTTTTCTCGTCTCATCTGTTTGCAATTGCAGGGTTTCTTGGATTGGT
ACTATTCTACAAACTATGGAAGAAGGGAACTCCCAGCCACCAACGTAAGG
GCATTTTATTAGCCCCTGAACCTCCAGGTGCCTTGCCAATCATCGGGCAC
ATTCACCTACTTGGCGGCAAGCGCACCCTTGCTCAAACCTTGGGAGCCAT
GGCTGACAAATATGGCCCTATCTTCTCAATCCGATTTGGAGCGTTCCCTG
CCCTTATCATTAGCAATCATGAAGCAGTCAAGGAGTGCTTCACTACTAAC
GACAGGGTGTTAGCTAGTCGGCCAAAATCAAATGCAGGAACATACCTGGG
ATACGATCATGCAGGATTTGGCTTTGCTCCTTACGGAGAGTATTGGCGTG
AGACACGAAAACTAGCTGTGGTCGAACTTCTATCTAGCCATAGACTTGAG
ACATCAAAGCATGTCCTAGATTTCGAGGTCAATGCATTTATCAAAAATTT
GTACTTGTTTTGCAAGAAAAATGGACCAGATGCAAACCCAAAGGCTGTGA
TTAGTCACAAATTTGAAGCCCTGACCTTGAATACGATCACAAGAATGATC
GCAGGCAAGAGATATATCTCGGATGGTGAAGAAGAAGATGATGTGGAGGC
ACGACATGTAATAAAAGTCATCAAAGACTTTATGTATGTTTCTGGTCTTA
TCGCTCCATCGGAAGCGATGCCATTTCTAGGATGGATGGAGTCCATCTTT
GGGGGACCTGTGAAATCCATGAAGCGTGTTGCAAAAGAGATAGATTCTAT
TATTGGAAGATGGGTGGATGAACATAAATTAAAGAGGCTTATGAGTGAGG
CAGACCACAACAATCAGGATTTCATCGACCTACTTCTATCTGCAATAGGG
GAGGATTCCATGTTCGGCTATACTCGAGAAACAATTATCAAGGCTACAGT
AATGAATTTATTCTTAGCAGGCGCGGACACAACATCCATTGCATTGACAT
GGATTTTGTCCAACTTGATGAACAATAGACATACCTTAAAGACTGCCCAA
GAGGAGCTAGATCTCAAAGTCGGCAGGGACAAATGGGTGCAAGACTCTGA
TATTGAGAAATTAGTGTATCTCCAAGCCGTTATTAAAGAAACATTGCGCC
TATACCCACCAGGGCCTATATCAGTTCCTCACGAGGCAAGAGAAGTTTGC
AGCATCAGCGGCTACCACGTTCAAAAGGGCACTCGTGTGATTGTGAATTT
ACGAAGGTTGCATCGAGACCCTCGAATTTGGTCCAATCCTGATGAGTTTC
AACCGGAAAGATTTCTTACAAGCCATGCAAATGTGGATGTTCTGGGACAA
CATTTTGAGCTGATCCCATTTGGCTCTGGTAGACGATCTTGTCCCGGGAT
GCCATTGGCATTGCAAATAACACACTTGACGATTGCTCGCACGCTCCAGG
GATTTGACTTAACCACTCCATTTAATGAGTCAGTGGATATGACTGAAGGG
CTAGGGATTACCATGCCCAAGGCAACTCCACTTGATGTTCTCCTGAGCCC
GCGCCTTCCTGCTGCATTGTACTTGCAGCTCTAG
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protein sequence of Tc01v2_p018230.1

>Tc01v2_p018230.1 ID=Tc01v2_p018230.1|Name=Tc01v2_p018230.1|organism=Theobroma cacao|type=polypeptide|length=528bp
MVFSSHLFAIAGFLGLVLFYKLWKKGTPSHQRKGILLAPEPPGALPIIGH
IHLLGGKRTLAQTLGAMADKYGPIFSIRFGAFPALIISNHEAVKECFTTN
DRVLASRPKSNAGTYLGYDHAGFGFAPYGEYWRETRKLAVVELLSSHRLE
TSKHVLDFEVNAFIKNLYLFCKKNGPDANPKAVISHKFEALTLNTITRMI
AGKRYISDGEEEDDVEARHVIKVIKDFMYVSGLIAPSEAMPFLGWMESIF
GGPVKSMKRVAKEIDSIIGRWVDEHKLKRLMSEADHNNQDFIDLLLSAIG
EDSMFGYTRETIIKATVMNLFLAGADTTSIALTWILSNLMNNRHTLKTAQ
EELDLKVGRDKWVQDSDIEKLVYLQAVIKETLRLYPPGPISVPHEAREVC
SISGYHVQKGTRVIVNLRRLHRDPRIWSNPDEFQPERFLTSHANVDVLGQ
HFELIPFGSGRRSCPGMPLALQITHLTIARTLQGFDLTTPFNESVDMTEG
LGITMPKATPLDVLLSPRLPAALYLQL*
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