Tc01v2_t016340.1

Overview
NameTc01v2_t016340.1
Unique NameTc01v2_t016340.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1314
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
Productalpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase
NoteBeta-1,2-N-acetylglucosaminyltransferase II
Cross References
External references for this mRNA
DatabaseAccession
GeneID18612481
GenbankXM_018126790.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc01v2_g016340Tc01v2_g016340Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc01v2_p016340.1Tc01v2_p016340.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto37314auto37314Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto37315auto37315Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc01v2_t016340.1 ID=Tc01v2_t016340.1|Name=Tc01v2_t016340.1|organism=Theobroma cacao|type=mRNA|length=1314bp
ATGCTGTCTGTTGTTTGCTCTATGGCTAATTATAAGAAACCCCGTTTGAA
GGATGCGGCTTTTAAACGTTTGCTGTCTGTAGTTTTAGTTACTTTATTAG
GGGTTTCACTTTTAATAGTTTCTCTTAGGACCAATGTTAACCCAGCTTCT
AATGGATTCGATGAAGATTTAAGTGGAAGTGATGATATTCAGAGCTCTAG
TGGGAAACTCAACCTTCCTCAGCAGAATGAATTTTCAATCCAATTGGAAA
AACGAAACTGGTTGCCCCCTAGGAATGTAGATCTATATCCAAAGTTAGCT
AAAGATCATATAACCATTGTTTTATACGTGCATAATCGGCCGCAATATCT
CCAAGTAGTTGTTAAGAGCTTGTCCAAGGTTGTGGGGATAAGTGAAACTT
TATTGATCGTTAGCCATGATGGTTACTTTGAAGAAATGAATAAGATCGTG
GAAGGGATCAAATTTTGCCAAGTGAAACAGATATTTGCCCCTTATTCGCC
ACATGTGTTCACTGACAGTTTTCCTGGTGTGTCATCAAATGACTGTATGG
AAAAGGATGATGCAGAGAAGAAACATTGTATTGGGAATCCTGATCAGTAT
GGAAACCACCGATCTCCGAAGATAGTTTCTTTGAAGCATCATTGGTGGTG
GATGATGAACACTGTGTGGGATGGATTGAAGGAGACCAGAGGGCATGATG
GACATATTCTTTTCATAGAAGAGGATCACTTTATTTATCCCAATGCATAT
CGCAACTTACAGCTTCTTGTATCTATGAAGCCCAACAAATGCCCAGATTG
CTATGCTGCAAATCTGGCACCTTGTGACGTGAATACAAGAGGAGAAGGAT
GGGATAGTTTGGTTGCAGAGAGAATGGGAAATGTGGGTTATGCCTTTAAC
CGGACTGTCTGGAGGAAAATCCATAGGAAGGCTAAAGAGTTTTGCTTCTT
TGATGATTACAACTGGGATATAACGATGTGGGCAACAGTTTATCCTTCAT
TTGGCAGTCCAGTGTACACATTACGAGGTCCAAGGACTAGTGCAGTTCAC
TTTGGGAAGTGCGGTTTACATCAGGGCCAAGGTCAGAGTAATGCTTGCAT
TGATAATGGATCAGTGAACATTCAAGTAGATGAAATTGATAAAGTTGCTA
ATATTGGATCAGAATGGGATGTGCGTGTCTATCACAATCAACCAGGGTAT
AAAGCTGGGTTTAAGGGTTGGGGTGGTTGGGGGGATGACAGAGACCGTCA
ATTGTGTCTGAGTTATTCTCAAATGTACCATTCCTTTAACACTTCTTCAG
CTGTGATGAGTTGA
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protein sequence of Tc01v2_p016340.1

>Tc01v2_p016340.1 ID=Tc01v2_p016340.1|Name=Tc01v2_p016340.1|organism=Theobroma cacao|type=polypeptide|length=438bp
MLSVVCSMANYKKPRLKDAAFKRLLSVVLVTLLGVSLLIVSLRTNVNPAS
NGFDEDLSGSDDIQSSSGKLNLPQQNEFSIQLEKRNWLPPRNVDLYPKLA
KDHITIVLYVHNRPQYLQVVVKSLSKVVGISETLLIVSHDGYFEEMNKIV
EGIKFCQVKQIFAPYSPHVFTDSFPGVSSNDCMEKDDAEKKHCIGNPDQY
GNHRSPKIVSLKHHWWWMMNTVWDGLKETRGHDGHILFIEEDHFIYPNAY
RNLQLLVSMKPNKCPDCYAANLAPCDVNTRGEGWDSLVAERMGNVGYAFN
RTVWRKIHRKAKEFCFFDDYNWDITMWATVYPSFGSPVYTLRGPRTSAVH
FGKCGLHQGQGQSNACIDNGSVNIQVDEIDKVANIGSEWDVRVYHNQPGY
KAGFKGWGGWGDDRDRQLCLSYSQMYHSFNTSSAVMS*
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