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Properties
Property Name | Value |
Model evidence | Supporting evidence includes similarity to: 1 EST, 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns |
Product | histidine kinase 2, transcript variant X3 |
Note | Histidine kinase 2 |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc01v2_t016100.3 ID=Tc01v2_t016100.3|Name=Tc01v2_t016100.3|organism=Theobroma cacao|type=mRNA|length=3816bp ATGAGTTGTTCTTCTGGAACTGGGAATTTTGTGAAGCTCTCAAGGCTCCT TGGGGAAATACGTAAGTGTGCTTTGGTCAAGATGTCTATGAACGGCAAGC TTTCTGGTTCTAATTGTAGATTATCAGCAAATTTCAGGCTGAAGAAGGCA AAAGAGACTATGCATGGGCCCAATTCTTTCAGGAAATGGAAGAGAAACCT TCTCTTTCTCTGGCTTTTAGGCTTTGTTTCGACAGGAATTATTTGGTTTT TCTTGAGTTTCAATAGTGTAGCTTCGGAGAGGAATGAGAAAAGTCCTGAT TCTTGTGATGAGAAGGCAAGAATCTTGCTCCAACATTTCAATGTTAGCAA GAACCAGTTTCATGCTCTAGCTTCTTTCTTCTACGAATCAGATCAGATAA AATTCCTCGAATGTACCAGAGATTCAGGACCTAAAAAGCCATCAAGTGAT GGTATTGCCTGTGCTCTTAAGGTACTGTGTTCAGAGCACCAAGACCTCAG AAAGCAGCAGATGTGGGTTGTAAGAAATACAGAACTTAAGGATCAATGCC CAGTCCAAGTTGAGAATATTCCCAGCGAGCATGACTTGTCATTGCTGGAG CACGATACCTTATCATTTGTCTCACAAATTGCAGTTTCATTAGTATCATG GGAGCATCACAGTGGTGGAAAGAACATCTCACAAAGAAGTGCACTAGGAG TCGAATCAAAAGACAATTGTGAGAACTTGTCATTTTGTATGGTGAAAGGA TGTTGGTTGCTTCTTGTTGGAGTGATACTGAGCTGGAAGATTCCTGGAGT TCGTTTGAAGCTCTGGAGGAACAGAAAGAATGAGCCAGCTCTGCTGCAGC CTGTGGCTCAGCAACTACCGCTGCTGCTGCAACAGAAGCAGCAGCAAACC CAGAGCCCTCCTAAAGGTGCAGGGAAGTGGAGAAAGAAACTCTTAATAAC ATTTGTATTTGTGGGGATCTTTACATCCTTCTGGTTATTTTGGCATTTAA ACCAAAAGATCATTTTAAGGAGAGAAGAGACACTTGCCAACATGTGTGAT GAAAGAGCACGGATGTTGCAGGATCAGTTCAATGTTAGCATGAATCATGT TCATGCGTTGGCTATTCTCGTATCCACTTTTCACCATGGGAAGCATCCAT CTGCTATTGATCAGAAAACATTTGGTGAATATACTGAAAGAACAGCTTTT GAGAGGCCACTTACTAGTGGTGTCGCTTATGCACTGAAAGTTCTTCACTC AGAGAGGGAGCAGTTTGAGAAGCAGCATGGATGGACAATAAAGAAAATGG AAACTGAGGACCAGACTTTGGTCCAAGATTGCCTGACAGAAAATTTGGAT CCTGCACCCATTAAAGATGAATATGCACCAGTAATATTTTCACAAGAAAC TGTGTCTCATATTGTTTCTATTGACATGATGTCTGGAAAGGAAGACCGTG AGAACATCCTGCGGGCAAGGGCAACTGGAAAGGGAGTATTGACATCTCCT TTTAAGCTGTTAAAATCCAATCACCTTGGTGTTGTTCTCACATTTGCTGT TTATAACAAGGATTTGCCTCCAAGTGCTACACCAAGGCAACGAACTGAAG CTACTGTGGGGTACCTGGGTGCGTCTTATGATGTCCCCTCTCTGGTGGAG AAGCTTCTGCACCAACTTGCCAGCAAGCAAACCATTGTTGTCAATGTTTA CGACACAACCAATGCATCTGCTGCCATCAGCATGTACGGTACTGATGTAA CTGATACTGGCCTACTGCATGTCAGTAGCCTTGATTTTGGAGATCCATTA AGGAAGCATGAGATGCACTGCAGGTTCAAGCAAAAACCCCCGTTACCTTG GACAGCAATTAATGCATCAGTAGGAGTCCTAGTTATTACTTTGCTTGTCG GTCATATCTTCCATGCTGCTATATGTCGAATTGCAAAAGTAGAGAATGAC TACCGTGAGATGATGGAGCTCAAAGCTCGTGCTGAAGCTGCAGATGTGGC CAAATCTCAGTTTCTAGCAACTGTTTCCCATGAGATCAGGACTCCGATGA ATGGTGTTTTAGGTATGCTGAAAATGCTGATGGATACAGAGCTTGATGCG ATCCAAAGGGACTATGCTGAGACTGCTCATGCTAGTGGGAAAGATCTTAT CTCACTGATAAATGAGGTCCTTGATCAGGCTAAGATAGAATCAGGCAGGC TTGAGCTTGAGGATGTGCCCTTTGATCTACGCACTCTTCTTGATAACGTC CTCTCACTTTCCTCAGACAAATCTAATTATAAAGGGATTGAGTTGGCAGT TTATGTATCCGATCGGGTTCCTGAAGTTGTTGTTGGTGATCCCGGGCGGT TTCGGCAAATAATTACAAATCTTGTTGGAAATTCAATTAAGTTCACGCAG GATAAGGGACATATTTTTGTCTCAGTGCATCTGGTAGATGAAGTGAAGGG TGCATTTGATGTGGGAGACAAGGTGCTGCAACCAGGCTTGAACTTAGTTC AAGACATGTCAAGCAAAACATATAATACGTTAAGTGGGTTTCTAGTGGTG GACAGGTGGAGAAGCTGGGAGAACTTTACAATACTAAATGGCAAAGACTC AATGGAGGATCCTGAAAAGATTAAATTACTAGTAACAGTTGAGGACACAG GTGTGGGAATTCGTTTAGATGCACAGGATCGAATTTTCACTCCTTTTGTG CAAGCTGACAGTTCCACTTCACGACATTATGGTGGGACTGGAATAGGATT GAGCATCAGCAAACGTCTTGTACAACTCATGCATGGGGAGATCGGGTTTG TGAGTGAACCTGGCACTGGCAGTACTTTCTCATTCACTGCAGCTTTTGGA AAAGGTGAAGCGAGTTCTCTGGATTCAAAGTGGAAGCAATATGATCCAGT GATTTCGGAGTTCCAAGGTTTGGGAGCACTGATTATTGATAATAGAAGCA TCCGAGCTGAGGTTACAAGATACCATCTTCGGAGATTGGGAATATCTGTG GATATAACTTCCAGTATGGAGTTAGCGTACACCTATCTGTCAAGCACTTG TGGCACAAGTGCATTTGCACATTTGGCCATGATTCTTATTGACAAAGATG TTTGGAATCAGGAAACAGTTCTTCAGTTACGATCTTTGCTCAAAGATCAT AGGCAAAATGACAGAGTAGATGTTTCGACAAACCTTCCAAAAATTTTTCT CTTGGCTACCTCCATGAGCCCGATTGAGCGCTCCAAGCTTAAGACTGCTG CTTTTGTAGATAATGTGCTGATGAAGCCACTTCGGTTGAGTGTCTTGATT GCCTGTTTCCAAGAAGCCCTTGGAAATGGTAGAAAGGAGCAAGTACATAG AGAGAGAATGTCTACGCTTGGGAGCTTACTACGAGAAAAGCGGATTTTAG TGGTTGATGACAATAAGGTTAACAGAAGAGTGGCAGAAGGTGCTTTAAAG AAATATGGAGCAATTGTTTCCTGTGTGGAAAGAGGCCAGGATGCGCTGCA CAAGCTTAAGCCACCCCATAATTTTGATGCTTGCTTCATGGATCTCCAGA TGCCAGAAATGGATGGGTTTGAAGCTACTAGGCAAATCCGCTGCGTGGAG AGTGAGGTCAATGAAAAAATTGTTTCTGGAGAAGCATCCATTGAGATGTA CGGAAATGTGCATCAATGGCACATTCCAATTTTAGCAATGACAGCTGATG TCATCCAAACTACAAATGAAGAGTGCATGAAATGTGGGATGGATGGCTAT GTGTCAAAGCCTTTTGAGGAAGAGCAACTTTATTCAGCTGTTGCAAGTTT TTTTGAGTCTGGTTGA back to topprotein sequence of Tc01v2_p016100.3 >Tc01v2_p016100.3 ID=Tc01v2_p016100.3|Name=Tc01v2_p016100.3|organism=Theobroma cacao|type=polypeptide|length=1272bp
MSCSSGTGNFVKLSRLLGEIRKCALVKMSMNGKLSGSNCRLSANFRLKKA KETMHGPNSFRKWKRNLLFLWLLGFVSTGIIWFFLSFNSVASERNEKSPD SCDEKARILLQHFNVSKNQFHALASFFYESDQIKFLECTRDSGPKKPSSD GIACALKVLCSEHQDLRKQQMWVVRNTELKDQCPVQVENIPSEHDLSLLE HDTLSFVSQIAVSLVSWEHHSGGKNISQRSALGVESKDNCENLSFCMVKG CWLLLVGVILSWKIPGVRLKLWRNRKNEPALLQPVAQQLPLLLQQKQQQT QSPPKGAGKWRKKLLITFVFVGIFTSFWLFWHLNQKIILRREETLANMCD ERARMLQDQFNVSMNHVHALAILVSTFHHGKHPSAIDQKTFGEYTERTAF ERPLTSGVAYALKVLHSEREQFEKQHGWTIKKMETEDQTLVQDCLTENLD PAPIKDEYAPVIFSQETVSHIVSIDMMSGKEDRENILRARATGKGVLTSP FKLLKSNHLGVVLTFAVYNKDLPPSATPRQRTEATVGYLGASYDVPSLVE KLLHQLASKQTIVVNVYDTTNASAAISMYGTDVTDTGLLHVSSLDFGDPL RKHEMHCRFKQKPPLPWTAINASVGVLVITLLVGHIFHAAICRIAKVEND YREMMELKARAEAADVAKSQFLATVSHEIRTPMNGVLGMLKMLMDTELDA IQRDYAETAHASGKDLISLINEVLDQAKIESGRLELEDVPFDLRTLLDNV LSLSSDKSNYKGIELAVYVSDRVPEVVVGDPGRFRQIITNLVGNSIKFTQ DKGHIFVSVHLVDEVKGAFDVGDKVLQPGLNLVQDMSSKTYNTLSGFLVV DRWRSWENFTILNGKDSMEDPEKIKLLVTVEDTGVGIRLDAQDRIFTPFV QADSSTSRHYGGTGIGLSISKRLVQLMHGEIGFVSEPGTGSTFSFTAAFG KGEASSLDSKWKQYDPVISEFQGLGALIIDNRSIRAEVTRYHLRRLGISV DITSSMELAYTYLSSTCGTSAFAHLAMILIDKDVWNQETVLQLRSLLKDH RQNDRVDVSTNLPKIFLLATSMSPIERSKLKTAAFVDNVLMKPLRLSVLI ACFQEALGNGRKEQVHRERMSTLGSLLREKRILVVDDNKVNRRVAEGALK KYGAIVSCVERGQDALHKLKPPHNFDACFMDLQMPEMDGFEATRQIRCVE SEVNEKIVSGEASIEMYGNVHQWHIPILAMTADVIQTTNEECMKCGMDGY VSKPFEEEQLYSAVASFFESG* back to top
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