Tc01v2_t015380.1

Overview
NameTc01v2_t015380.1
Unique NameTc01v2_t015380.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length951
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 40 ESTs, 48 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Product1-aminocyclopropane-1-carboxylate oxidase 1
Note1-aminocyclopropane-1-carboxylate oxidase 1
Cross References
External references for this mRNA
DatabaseAccession
GeneID18612358
GenbankXM_007049121.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc01v2_g015380Tc01v2_g015380Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc01v2_p015380.1Tc01v2_p015380.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto35368auto35368Theobroma cacaoexon
exon-auto35369auto35369Theobroma cacaoexon
exon-auto35370auto35370Theobroma cacaoexon
exon-auto35371auto35371Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto35372auto35372Theobroma cacaoCDS
CDS-auto35373auto35373Theobroma cacaoCDS
CDS-auto35374auto35374Theobroma cacaoCDS
CDS-auto35375auto35375Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc01v2_t015380.1 ID=Tc01v2_t015380.1|Name=Tc01v2_t015380.1|organism=Theobroma cacao|type=mRNA|length=951bp
ATGGCAACTTTCCCAGTGATCAACTTGGCAAAGCTCAACGGTGAGGAGAG
AGCAGCAACCATGGAGAAAATCAAGGATGCCTGTGAAAACTGGGGTTTCT
TTGAGCTGCTGAACCATGGGATTCCCCATGATTTTCTTGACTCTGTTGAA
AGATTGACAAAAGAACATTACAAGAAAAGCATGGAGCAGAGGTTCCAGGA
ACTGGTAGCAAGCAAGGCCCTGGAGGGTCTCCAGGCAGAGGTGACTGATA
TGGATTGGGAGAGCACATTCTTCCTGCGCCATCTCCCTGAGTCAAACATG
GCTGAAATCCCAGATCTCGCTGATGAATACAGGAAGGTGATGAAAGAATT
TGCATTGAAATTGGAGAAACTAGCAGAGGAGCTCCTGGACTTGTTGTGTG
AAAACCTTGGAGTAGAGAAAGGATACCTGAAAAAGGCCTTCTATGGGTCA
AGAGGACCAACCTTTGGCACCAAAGTCAGCAACTACCCACCATGCCCAAC
ACCAGACAAAATCAAGGGACTCAGAGCCCACACAGATGCTGGTGGCATCA
TCTTGCTCTTCCAAGACGCCAAAGTGAGTGGCCTCCAGCTTCTTAAAGAC
GGCGAGTGGATCGATGTTCCTCCCATGCGCCACTCCATTGTAATTAACCT
TGGGGATCAGCTCGAGGTGATCACCAATGGCAAATACAAGAGTGTTGAGC
ACAGAGTGATCGCCCAAACCGACGGAGCTCGAATGTCAATAGCTTCATTC
TACAACCCTGGCAGTGATGCTGTTATCTACCCAGCACCAGCTCTGCTGGA
GAAGGAAGCAGAGGAGAACAAACAAGTCTACCCGAAATTTGTGTTTGAAG
ACTACATGAAGCTATATGCTAGACTGAAATTCCAGGCCAAGGAACCAAGA
TTTGAAGCCATGAAAGCCATGGAAACAACTGTTCCAATTGCAACAGCATA
A
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protein sequence of Tc01v2_p015380.1

>Tc01v2_p015380.1 ID=Tc01v2_p015380.1|Name=Tc01v2_p015380.1|organism=Theobroma cacao|type=polypeptide|length=317bp
MATFPVINLAKLNGEERAATMEKIKDACENWGFFELLNHGIPHDFLDSVE
RLTKEHYKKSMEQRFQELVASKALEGLQAEVTDMDWESTFFLRHLPESNM
AEIPDLADEYRKVMKEFALKLEKLAEELLDLLCENLGVEKGYLKKAFYGS
RGPTFGTKVSNYPPCPTPDKIKGLRAHTDAGGIILLFQDAKVSGLQLLKD
GEWIDVPPMRHSIVINLGDQLEVITNGKYKSVEHRVIAQTDGARMSIASF
YNPGSDAVIYPAPALLEKEAEENKQVYPKFVFEDYMKLYARLKFQAKEPR
FEAMKAMETTVPIATA*
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