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Properties
| Property Name | Value |
|---|
| Model evidence | Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns |
| Product | Fanconi anemia group D2 protein homolog, transcript variant X6 |
| Note | Hypothetical protein |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc01v2_t014960.6 ID=Tc01v2_t014960.6|Name=Tc01v2_t014960.6|organism=Theobroma cacao|type=mRNA|length=4725bp
ATGGCCAAACCACTCTCCCTCCCTTTGTATGAAAGAGTCTCTTGTAAAGG
CATCATGATCAGGCGAACCTTGGATGTCACCGTCTTCTGCCTTTTACTCT
CTCTCCTCGCTTATCGCCTCCGTTCCCTCAGCAATCAAGGATTCACTTGG
CTCCTCGCCTTTCTATGTGAGTCATGGTTTGCTTTTTTATGGCTTCTCAA
CCTTAGCACTAGATGGAATCCCGTTGAGTACAAAACATACCCTGAAAATC
TCTTGCCACGGTCACTTGGGCTTCCCCCTATAGATATGTTTGTAACGACT
GCAGACCCCGTGCTTGAACCGCCCTTGGTAACAGTAAACACTGTTCTCTC
TTTGTTGGCAGTGGATTATCCAGCTGAAAAGCTAGCTTGCTATGTATCAG
ACGATGGTTGCTCCCCTCTCACCTTCTACTCTCTTGTTGAAGCATCAAAG
TTTGCTAAGCTTTGGGTTCCGTTTTGTAAGAAGTATAGCATTCAAATCAG
AGCCCCCTTTCAATACTTCTCCGCCAAGTCCCTGCCTCCTGTTGATGGCT
TATCAGGTTTCGAACTGGAATGGAAAAAGATGAAGGATGAGTACGAGCAT
CTTTGTCGAAAGATAGAAGATGCAGTCCACAAGTTGATGCTGGGTCCCCA
TTCCACTGAATATGCGGTCTTCAAGAACATAGAGCGTGACAATCATCCAA
GTATTGTCAAGGTTATATTCGAAAACAAGGAAGATCATTCAAGTTGTTTG
CCTCATCTAGTTTACGTTTCCAGAGAGAAACGTCCAAATCATCCACATCA
TTTTAAAGCCGGTGCCATGAATGTTTTGCAGACCAGAGTCTCAGGAGTGA
TGACCAATGCTCCCTTTATGTTGAATGTGGACTGCGACATGTTTGCCAGC
AATCCAAAGATCATTCTCCATGCCGTTTGCTTACTAGTAGGCGTCGACGA
TGAACAAGAATGTGCCTTTGTTCAATGTCCTCAGATATTCTACGATGCTT
TGAAAGACGATCCTTTTGGAAACCGAATGACAGTTCCTTTCACTATTTTC
GTAGGCGGGATGGCTGGGATACAAGGGCCTCCCTATGCTGGAACTGGATG
TTTCCACAGACGTAAAGCTATATACGGATTACCCCCAAATCATGATTTTG
ATATCAAAGATTGCAAAATATTGGAAGAAAGATTTGGAAAATCCACCGAG
TTCAGCGAGTCAGTGGCTGAAATCCTGTTTGGGTCAGGAGAAAAACATTT
TCCATGTGATATTTCAAGCATCACTGGGTCAGCATGCAGAGTTGCTAATT
GTAGCTACGAGAATAATACTTGCTGGGGAATAGAGGTGGGATTGACGTAT
GGATCTGTAACAGAAGATGTTCTAACAGGATTAAGGATCCATACAATGGG
TTGGAAATCTGTTTTGCTGATGCCCAGTCCACCGGCATTTATGGGCTGTG
CACCTCCAGGTGGACCCGTCTCAATGACACAAATGAAGAGATGGGGTACA
GGCCTGCTTGAGGTTCTCTTCAGCAAACATTCTCCCATTCTTTCAGCCTT
CAGCACTAAGCTCCATTTTAGGCAGGCTTTAGCCTATCTGCAAATTGTTA
TGTGGGCTTCACGCTCCATTCCTCAGTTCTGTTATAATATGCTATCCGCC
TATTGCATCACCACCAACTCTCAATTCTTGCCTAAGGTCATAACCATTGC
ACTATCATGCATTAGAACAATTGATGCGGAGCAAATGCCTTGTCTGCTTC
GATTTTTACTGCTCTCTGCCACACAAGTAAATGTTCGAAGAATAATCTCA
CAAATACGTGAGCATTTAAAGTTTCTCAGTGTGCCAAATACTCACACATT
GCAAAAAAATAAACTCAAAGGGAAGTTGCTTGTTGACAACACAGAGGCAT
CTATTCTAGATGCCTTGAGATCTAGTCTTCAATTTAAGAGTATACTCTGT
CAGGAGATTTTGAAGGAATTGAATGGCCTTGAGAAACCTCGAGATCACAA
AATCATAGACATATGGTTGCTTGTGCTATTGTACACAAATGGTGAGTCCA
TGCGAAAAAGCATTGAGAAGGTATTTAAGAAGAAAGTTATTGAAGGTTGC
ATTCAGGAAGTTATGCTTGATCAGTGCATTTATGGGAACAAGGAACTGGC
AAAGGAATATTTCCTGTCCTTGCTTTCTTTATCTGAGTACCTATTGGCAT
GCAAAGAACAAAAGGCAAGGGATTTTGGCATTTACATGTATACTCTTCTT
TTTGAAGAGTTTGCTGATACTTATTCAAGACAGGAAGTTCTTGGTGCACT
AGTCACTCATGTGGGCTCTGGTGTCAAGTCTGAAGTAAGTTCTGCTCTGC
AGGTTATGGCTTCACTGGCCACAAAACATGCACAGGAATTAATTCCACTT
TCTTCTCATATAAATGGAATCTTGGACTACTTGGAGGGACTGACTGTTGA
AAATCTTCATAAGGTTTACGAGGTCTTCAGCCATATGGCACTGCTAGCTC
GCTCTAGTTCTGACTGTTTTGGCTCTTCCATTGCAAATGAACTCTTGATA
ATTGTTCAAAAGCAGCATCACCCTGCAATTGGGCAGGTCAGCCATCCGGA
TCTGAAGTACAAAAAGATGGGCCTCATTGGAATCTTGAAAATTGTTTCAT
GTCTTGGGGATGCAAGTAATGTCACATTATCATCACCTTTTCAGAAATCA
AATACTGAGGAGGCCTTGGAGCTCCTTGAAACATCCCTGGAATCTTGCAA
ACAGTTGTGCTTATCATTGATCTTCTTTTACGATGAACTGACTGCAATTT
TGGAAAGTAGAACTCTTCACACTGTCATCGTGGACTGGATTGGCAAGCAT
GTAGGAGAATTTGAATCTATTTTCCTGTCTGATCTTGATGGTGGCCAATT
GCCTAGCAGGAATTCATATTGTGGTTTAGAAGGGGAGCTATGGATGAACT
TGGATGGTGAAATATCTCCTATTTGTCTGAACATTCTGCCATTAGCTTCT
TCTTCGCAGTCTGCTTGTTTGCAATTTCTTCCTGCTAACTTTCATTTACT
ATCAGCTGTTGAAAGGTTGACAAATCAAGGATCTCTTGGTGGAATTGATG
CATTACTTGGCTGTCCTTTGCTCCTTCCCTCGTCTAAGTACTACTCAGAA
GCTGAATGGCTGTCTTTGACAGGAAAGCAGAAACAGATTATTTCTCTCTG
TCTTTATTATGCAGTAAACTGGCTACGGGAACTGCTTAATGCCTTCTGCA
CACAAGTAGCTGGAAGATTTGAATTTACAAGTCAGTCGACAAAAGAGGAC
ATAACATTGAAGCTGTTAAAGCGATTGAGGAACCTAGTATTTCTGGAAAG
CTTGTTAAATCATTCCATCAGAATGTGTCCTGTAGTACTACCTCAGCTCC
ATCTTCAAGTAGAGCATTGCGGATCGACGCTCATAAACCAACCAAACCAT
GTGGGGAATATGGAAAAGAAGAATGAGCCTAAGATGACACATGAATGCAC
ATCCCCAAACAAAAGGAAGCATAAAAAGATTGCGAAGACCTCAACGCCAG
GTACAGATGGAAAACTTCACCAGCCAACATTGATGGACGTGTTGAGGAAA
GCAGGAGTAGAGACAAGCCAAGAGATGACAAATGAAGTTTCTTCAAAGGA
GAGGACCTCAGCATCAGTAGATCGGCAATCCCATGTCTTTAATGAATCAG
TGCTTATAGAAGTTTCTCCACCTGCACAAGCTCTGGAATCACAGAAATTT
AGGTTCAGGCCTCTTTTATTGGAATGCTTCTCCATTTTGACCTTTTCAAA
GAACCATGACTCCTGCTGCTCTGACCCTGTGGCTGAGTTACCCTTATACC
TGTACCTCATTCATGATCTTCACTGCAAGTTGGATTACTTTGCTGCCCCG
GGGAAACAATGCTCCTCGAGAAGCTTGAGTTCTGTTGCTTTTACCAGGAT
GACGTTGGATGAATTTCTTAGCAAAATTAGACCACTCTTTCCAAGTCTTA
AGAGAAATTTAGATATTGCATTCTGTAGTCTTAAAGAAGGTAATGAAACT
TGTCAAGAACACTGGAACATTCAATCTGCTGCTGCTCACAACCCAGATAT
AATCAACCTTGTCCCATCAAAATCTTCAATTTCTACTATGGTGTATAAGG
AAGTACTTCATAGTTTCAGTAAGTTTTTCCTTGAGCAGATGCTAAACCTT
CCTGAAGTACAAAGGAATAAATCAGTTCTTTCAGATCTCCTTGAAGCCTT
TCAGCCCAATGAAACATTAGATGCTGGTGCTTCAGATGTACAGCCTTGTC
CTTCACCTGGTACAATAGAGTATTCATATCTTGGGGCTTGTTCATTTGTG
GAAAGTATCCTCCATGCAGCATGTTCTTTCTCCTTTATTCTGGCATCAGA
GGCTCTTTTCACTCTGGAATCAGCTGTTACATCAGTTTTAAATGTCGTTG
ATAAGTTGGAGGGAGATGATGTAAACATACAGTCAAGGTTTAACCAGATC
CTTCCTTTCTTGCGTGGCAAACTTGGATCGTCTGCTCAGAAACTTCTAAA
GCATAAGTGGGATGACGAAAATCTTGAGAATGGCTGGAAGAACAAAGGAG
AAATAGTACAAAAGATACTGCGGATCCACTTGGAATATACTGAATCAACT
GCTGATTTGCTAGATGAGCTTGCGTGCACAATTTTGCCACAGTTTTTCCA
TGTAGCACCTCTGTCCAGTGCTTGA back to topprotein sequence of Tc01v2_p014960.6 >Tc01v2_p014960.6 ID=Tc01v2_p014960.6|Name=Tc01v2_p014960.6|organism=Theobroma cacao|type=polypeptide|length=1575bp
MAKPLSLPLYERVSCKGIMIRRTLDVTVFCLLLSLLAYRLRSLSNQGFTW
LLAFLCESWFAFLWLLNLSTRWNPVEYKTYPENLLPRSLGLPPIDMFVTT
ADPVLEPPLVTVNTVLSLLAVDYPAEKLACYVSDDGCSPLTFYSLVEASK
FAKLWVPFCKKYSIQIRAPFQYFSAKSLPPVDGLSGFELEWKKMKDEYEH
LCRKIEDAVHKLMLGPHSTEYAVFKNIERDNHPSIVKVIFENKEDHSSCL
PHLVYVSREKRPNHPHHFKAGAMNVLQTRVSGVMTNAPFMLNVDCDMFAS
NPKIILHAVCLLVGVDDEQECAFVQCPQIFYDALKDDPFGNRMTVPFTIF
VGGMAGIQGPPYAGTGCFHRRKAIYGLPPNHDFDIKDCKILEERFGKSTE
FSESVAEILFGSGEKHFPCDISSITGSACRVANCSYENNTCWGIEVGLTY
GSVTEDVLTGLRIHTMGWKSVLLMPSPPAFMGCAPPGGPVSMTQMKRWGT
GLLEVLFSKHSPILSAFSTKLHFRQALAYLQIVMWASRSIPQFCYNMLSA
YCITTNSQFLPKVITIALSCIRTIDAEQMPCLLRFLLLSATQVNVRRIIS
QIREHLKFLSVPNTHTLQKNKLKGKLLVDNTEASILDALRSSLQFKSILC
QEILKELNGLEKPRDHKIIDIWLLVLLYTNGESMRKSIEKVFKKKVIEGC
IQEVMLDQCIYGNKELAKEYFLSLLSLSEYLLACKEQKARDFGIYMYTLL
FEEFADTYSRQEVLGALVTHVGSGVKSEVSSALQVMASLATKHAQELIPL
SSHINGILDYLEGLTVENLHKVYEVFSHMALLARSSSDCFGSSIANELLI
IVQKQHHPAIGQVSHPDLKYKKMGLIGILKIVSCLGDASNVTLSSPFQKS
NTEEALELLETSLESCKQLCLSLIFFYDELTAILESRTLHTVIVDWIGKH
VGEFESIFLSDLDGGQLPSRNSYCGLEGELWMNLDGEISPICLNILPLAS
SSQSACLQFLPANFHLLSAVERLTNQGSLGGIDALLGCPLLLPSSKYYSE
AEWLSLTGKQKQIISLCLYYAVNWLRELLNAFCTQVAGRFEFTSQSTKED
ITLKLLKRLRNLVFLESLLNHSIRMCPVVLPQLHLQVEHCGSTLINQPNH
VGNMEKKNEPKMTHECTSPNKRKHKKIAKTSTPGTDGKLHQPTLMDVLRK
AGVETSQEMTNEVSSKERTSASVDRQSHVFNESVLIEVSPPAQALESQKF
RFRPLLLECFSILTFSKNHDSCCSDPVAELPLYLYLIHDLHCKLDYFAAP
GKQCSSRSLSSVAFTRMTLDEFLSKIRPLFPSLKRNLDIAFCSLKEGNET
CQEHWNIQSAAAHNPDIINLVPSKSSISTMVYKEVLHSFSKFFLEQMLNL
PEVQRNKSVLSDLLEAFQPNETLDAGASDVQPCPSPGTIEYSYLGACSFV
ESILHAACSFSFILASEALFTLESAVTSVLNVVDKLEGDDVNIQSRFNQI
LPFLRGKLGSSAQKLLKHKWDDENLENGWKNKGEIVQKILRIHLEYTEST
ADLLDELACTILPQFFHVAPLSSA* back to top
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