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Properties
| Property Name | Value |
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| Model evidence | Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns |
| Product | Fanconi anemia group D2 protein homolog, transcript variant X4 |
| Note | Uncharacterized protein |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc01v2_t014960.3 ID=Tc01v2_t014960.3|Name=Tc01v2_t014960.3|organism=Theobroma cacao|type=mRNA|length=5370bp
ATGGCCAAACCACTCTCCCTCCCTTTGTATGAAAGAGTCTCTTGTAAAGG
CATCATGATCAGGCGAACCTTGGATGTCACCGTCTTCTGCCTTTTACTCT
CTCTCCTCGCTTATCGCCTCCGTTCCCTCAGCAATCAAGGATTCACTTGG
CTCCTCGCCTTTCTATGTGAGTCATGGTTTGCTTTTTTATGGCTTCTCAA
CCTTAGCACTAGATGGAATCCCGTTGAGTACAAAACATACCCTGAAAATC
TCTTGCCACGGTCACTTGGGCTTCCCCCTATAGATATGTTTGTAACGACT
GCAGACCCCGTGCTTGAACCGCCCTTGGTAACAGTAAACACTGTTCTCTC
TTTGTTGGCAGTGGATTATCCAGCTGAAAAGCTAGCTTGCTATGTATCAG
ACGATGGTTGCTCCCCTCTCACCTTCTACTCTCTTGTTGAAGCATCAAAG
TTTGCTAAGCTTTGGGTTCCGTTTTGTAAGAAGTATAGCATTCAAATCAG
AGCCCCCTTTCAATACTTCTCCGCCAAGTCCCTGCCTCCTGTTGATGGCT
TATCAGGTTTCGAACTGGAATGGAAAAAGATGAAGGATGAGTACGAGCAT
CTTTGTCGAAAGATAGAAGATGCAGTCCACAAGTTGATGCTGGGTCCCCA
TTCCACTGAATATGCGGTCTTCAAGAACATAGAGCGTGACAATCATCCAA
GTATTGTCAAGGTTATATTCGAAAACAAGGAAGATCATTCAAGTTGTTTG
CCTCATCTAGTTTACGTTTCCAGAGAGAAACGTCCAAATCATCCACATCA
TTTTAAAGCCGGTGCCATGAATGTTTTGCAGACCAGAGTCTCAGGAGTGA
TGACCAATGCTCCCTTTATGTTGAATGTGGACTGCGACATGTTTGCCAGC
AATCCAAAGATCATTCTCCATGCCGTTTGCTTACTAGTAGGCGTCGACGA
TGAACAAGAATGTGCCTTTGTTCAATGTCCTCAGATATTCTACGATGCTT
TGAAAGACGATCCTTTTGGAAACCGAATGACAGTTCCTTTCACTATTTTC
GTAGGCGGGATGGCTGGGATACAAGGGCCTCCCTATGCTGGAACTGGATG
TTTCCACAGACGTAAAGCTATATACGGATTACCCCCAAATCATGATTTTG
ATATCAAAGATTGCAAAATATTGGAAGAAAGATTTGGAAAATCCACCGAG
TTCAGCGAGTCAGTGGCTGAAATCCTGTTTGGGTCAGGAGAAAAACATTT
TCCATGTGATATTTCAAGCATCACTGGGTCAGCATGCAGAGTTGCTAATT
GTAGCTACGAGAATAATACTTGCTGGGGAATAGAGGTGGGATTGACGTAT
GGATCTGTAACAGAAGATGTTCTAACAGGATTAAGGATCCATACAATGGG
TTGGAAATCTGTTTTGCTGATGCCCAGTCCACCGGCATTTATGGGCTGTG
CACCTCCAGGTGGACCCGTCTCAATGACACAAATGAAGAGATGGGGTACA
GGCCTGCTTGAGGTTCTCTTCAGCAAACATTCTCCCATTCTTTCAGCCTT
CAGCACTAAGCTCCATTTTAGGCAGGCTTTAGCCTATCTGCAAATTGTTA
TGTGGGCTTCACGCTCCATTCCTCAGTTCTGTTATAATATGCTATCCGCC
TATTGCATCACCACCAACTCTCAATTCTTGCCTAAGGTCATAACCATTGC
ACTATCATGCATTAGAACAATTGATGCGGAGCAAATGCCTTGTCTGCTTC
GATTTTTACTGCTCTCTGCCACACAAGTAAATGTTCGAAGAATAATCTCA
CAAATACGTGAGCATTTAAAGTTTCTCAGTGTGCCAAATACTCACACATT
GCAAAAAAATAAACTCAAAGGGAAGTTGCTTGTTGACAACACAGAGGCAT
CTATTCTAGATGCCTTGAGATCTAGTCTTCAATTTAAGAGTATACTCTGT
CAGGAGATTTTGAAGGAATTGAATGGCCTTGAGAAACCTCGAGATCACAA
AATCATAGACATATGGTTGCTTGTGCTATTGTACACAAATGGTGAGTCCA
TGCGAAAAAGCATTGAGAAGGTATTTAAGAAGAAAGTTATTGAAGGTTGC
ATTCAGGAAGTTATGCTTGATCAGTGCATTTATGGGAACAAGGAACTGGC
AAAGGAATATTTCCTGTCCTTGCTTTCTTTATCTGAGTACCTATTGGCAT
GCAAAGAACAAAAGGCAAGGGATTTTGGCATTTACATGTATACTCTTCTT
TTTGAAGAGTTTGCTGATACTTATTCAAGACAGGAAGTTCTTGGTGCACT
AGTCACTCATGTGGGCTCTGGTGTCAAGTCTGAAGTAAGTTCTGCTCTGC
AGGTTATGGCTTCACTGGCCACAAAACATGCACAGGAATTAATTCCACTT
TCTTCTCATATAAATGGAATCTTGGACTACTTGGAGGGACTGACTGTTGA
AAATCTTCATAAGGTTTACGAGGTCTTCAGCCATATGGCACTGCTAGCTC
GCTCTAGTTCTGACTGTTTTGGCTCTTCCATTGCAAATGAACTCTTGATA
ATTGTTCAAAAGCAGGTCAGCCATCCGGATCTGAAGTACAAAAAGATGGG
CCTCATTGGAATCTTGAAAATTGTTTCATGTCTTGGGGATGCAAGTAATG
TCACATTATCATCACCTTTTCAGAAATCAAATACTGAGGAGGCCTTGGAG
CTCCTTGAAACATCCCTGGAATCTTGCAAACAGTTGTGCTTATCATTGAT
CTTCTTTTACGATGAACTGACTGCAATTTTGGAAAGTAGAACTCTTCACA
CTGTCATCGTGGACTGGATTGGCAAGCATGTAGGAGAATTTGAATCTATT
TTCCTGTCTGATCTTGATGGTGGCCAATTGCCTAGCAGGAATTCATATTG
TGGTTTAGAAGGGGAGCTATGGATGAACTTGGATGGTGAAATATCTCCTA
TTTGTCTGAACATTCTGCCATTAGCTTCTTCTTCGCAGTCTGCTTGTTTG
CAATTTCTTCCTGCTAACTTTCATTTACTATCAGCTGTTGAAAGGTTGAC
AAATCAAGGATCTCTTGGTGGAATTGATGCATTACTTGGCTGTCCTTTGC
TCCTTCCCTCGTCTAAGTACTACTCAGAAGCTGAATGGCTGTCTTTGACA
GGAAAGCAGAAACAGATTATTTCTCTCTGTCTTTATTATGCAGTAAACTG
GCTACGGGAACTGCTTAATGCCTTCTGCACACAAGTAGCTGGAAGATTTG
AATTTACAAGTCAGTCGACAAAAGAGGACATAACATTGAAGCTGTTAAAG
CGATTGAGGAACCTAGTATTTCTGGAAAGCTTGTTAAATCATTCCATCAG
AATGTGTCCTGTAGTACTACCTCAGCTCCATCTTCAAGTAGAGCATTGCG
GATCGACGCTCATAAACCAACCAAACCATGTGGGGAATATGGAAAAGAAG
AATGAGCCTAAGATGACACATGAATGCACATCCCCAAACAAAAGGAAGCA
TAAAAAGATTGCGAAGACCTCAACGCCAGGTACAGATGGAAAACTTCACC
AGCCAACATTGATGGACGTGTTGAGGAAAGCAGGAGTAGAGACAAGCCAA
GAGATGACAAATGAAGTTTCTTCAAAGGAGAGGACCTCAGCATCAGTAGA
TCGGCAATCCCATGTCTTTAATGAATCAGTGCTTATAGAAGTTTCTCCAC
CTGCACAAGCTCTGGAATCACAGAAATTTAGGTTCAGGCCTCTTTTATTG
GAATGCTTCTCCATTTTGACCTTTTCAAAGAACCATGACTCCTGCTGCTC
TGACCCTGTGGCTGAGTTACCCTTATACCTGTACCTCATTCATGATCTTC
ACTGCAAGTTGGATTACTTTGCTGCCCCGGGGAAACAATGCTCCTCGAGA
AGCTTGAGTTCTGTTGCTTTTACCAGGATGACGTTGGATGAATTTCTTAG
CAAAATTAGACCACTCTTTCCAAGTCTTAAGAGAAATTTAGATATTGCAT
TCTGTAGTCTTAAAGAAGGTAATGAAACTTGTCAAGAACACTGGAACATT
CAATCTGCTGCTGCTCACAACCCAGATATAATCAACCTTGTCCCATCAAA
ATCTTCAATTTCTACTATGGTGTATAAGGAAGTACTTCATAGTTTCAGTA
AGTTTTTCCTTGAGCAGATGCTAAACCTTCCTGAAGTACAAAGGAATAAA
TCAGTTCTTTCAGATCTCCTTGAAGCCTTTCAGCCCAATGAAACATTAGA
TGCTGGTGCTTCAGATGTACAGCCTTGTCCTTCACCTGGTACAATAGAGT
ATTCATATCTTGGGGCTTGTTCATTTGTGGAAAGTATCCTCCATGCAGCA
TGTTCTTTCTCCTTTATTCTGGCATCAGAGGCTCTTTTCACTCTGGAATC
AGCTGTTACATCAGTTTTAAATGTCGTTGATAAGTTGGAGGGAGATGATG
TAAACATACAGTCAAGGTTTAACCAGATCCTTCCTTTCTTGCGTGGCAAA
CTTGGATCGTCTGCTCAGAAACTTCTAAAGCATAAGTGGGATGACGAAAA
TCTTGAGAATGGCTGGAAGAACAAAGGAGAAATAGTACAAAAGATACTGC
GGATCCACTTGGAATATACTGAATCAACTGCTGATTTGCTAGATGAGCTT
GCGTGCACAATTTTGCCACAGGTTTCTTGTACAACAATGGCAGAAGATGA
GGATTATGGTTACCCAACTCTATGTTCTGCAACATTTCTCTCCTGGTACC
ATGTACTGTTTGAAGTGAACCTCACAGTTCTTGACAAATTGGTTAAGGAG
GTTGTTCACTTGGAGAAGTGCCGACCTGGTTTTCAACCCGAAAATGTTCA
CACACATTTGATCAAGATGCAAAAGAACGTGAATGTGGTTGTTGCACTAG
TTAACATGTGCAGAACCTATGACAAGGTCACCCTGCATGCCATGGCTGTC
AAGTATGGTGGGAAATTCATCGATTCCTTCCTTAAAGCTTTTGACTTCTT
GCAGGTTCACTTCCAAATGCATAATGAAGTCATAATTCTACTGGTGAAAG
AACTTCAAAAGGCTACAAGAACAATTCAGACTCTATGTTCTGAAGCAAAG
GGCTTGAAGCAAACAGCCATCACTGGCAAAATACCTGCTACCAAAAGATC
TTTGGAACGCTTTTTGTTTCGTGTCAAGGCTCTTCTCCATACAACATCTA
GTGGATGCACTTTCTGGATGGGTAATCTAAAACACAAGGATCTCAGAGGT
CAGGTGGTGAGTTCCCAGGCATATGTAGATGATCGAAACGACAGCATTGA
TCAAGATCCTGAGGATGTGGATCCACCAGTCATTGTTGCCACTGCTAGTG
GAAACAGTGAAACAGACTGA back to topprotein sequence of Tc01v2_p014960.3 >Tc01v2_p014960.3 ID=Tc01v2_p014960.3|Name=Tc01v2_p014960.3|organism=Theobroma cacao|type=polypeptide|length=1790bp
MAKPLSLPLYERVSCKGIMIRRTLDVTVFCLLLSLLAYRLRSLSNQGFTW
LLAFLCESWFAFLWLLNLSTRWNPVEYKTYPENLLPRSLGLPPIDMFVTT
ADPVLEPPLVTVNTVLSLLAVDYPAEKLACYVSDDGCSPLTFYSLVEASK
FAKLWVPFCKKYSIQIRAPFQYFSAKSLPPVDGLSGFELEWKKMKDEYEH
LCRKIEDAVHKLMLGPHSTEYAVFKNIERDNHPSIVKVIFENKEDHSSCL
PHLVYVSREKRPNHPHHFKAGAMNVLQTRVSGVMTNAPFMLNVDCDMFAS
NPKIILHAVCLLVGVDDEQECAFVQCPQIFYDALKDDPFGNRMTVPFTIF
VGGMAGIQGPPYAGTGCFHRRKAIYGLPPNHDFDIKDCKILEERFGKSTE
FSESVAEILFGSGEKHFPCDISSITGSACRVANCSYENNTCWGIEVGLTY
GSVTEDVLTGLRIHTMGWKSVLLMPSPPAFMGCAPPGGPVSMTQMKRWGT
GLLEVLFSKHSPILSAFSTKLHFRQALAYLQIVMWASRSIPQFCYNMLSA
YCITTNSQFLPKVITIALSCIRTIDAEQMPCLLRFLLLSATQVNVRRIIS
QIREHLKFLSVPNTHTLQKNKLKGKLLVDNTEASILDALRSSLQFKSILC
QEILKELNGLEKPRDHKIIDIWLLVLLYTNGESMRKSIEKVFKKKVIEGC
IQEVMLDQCIYGNKELAKEYFLSLLSLSEYLLACKEQKARDFGIYMYTLL
FEEFADTYSRQEVLGALVTHVGSGVKSEVSSALQVMASLATKHAQELIPL
SSHINGILDYLEGLTVENLHKVYEVFSHMALLARSSSDCFGSSIANELLI
IVQKQVSHPDLKYKKMGLIGILKIVSCLGDASNVTLSSPFQKSNTEEALE
LLETSLESCKQLCLSLIFFYDELTAILESRTLHTVIVDWIGKHVGEFESI
FLSDLDGGQLPSRNSYCGLEGELWMNLDGEISPICLNILPLASSSQSACL
QFLPANFHLLSAVERLTNQGSLGGIDALLGCPLLLPSSKYYSEAEWLSLT
GKQKQIISLCLYYAVNWLRELLNAFCTQVAGRFEFTSQSTKEDITLKLLK
RLRNLVFLESLLNHSIRMCPVVLPQLHLQVEHCGSTLINQPNHVGNMEKK
NEPKMTHECTSPNKRKHKKIAKTSTPGTDGKLHQPTLMDVLRKAGVETSQ
EMTNEVSSKERTSASVDRQSHVFNESVLIEVSPPAQALESQKFRFRPLLL
ECFSILTFSKNHDSCCSDPVAELPLYLYLIHDLHCKLDYFAAPGKQCSSR
SLSSVAFTRMTLDEFLSKIRPLFPSLKRNLDIAFCSLKEGNETCQEHWNI
QSAAAHNPDIINLVPSKSSISTMVYKEVLHSFSKFFLEQMLNLPEVQRNK
SVLSDLLEAFQPNETLDAGASDVQPCPSPGTIEYSYLGACSFVESILHAA
CSFSFILASEALFTLESAVTSVLNVVDKLEGDDVNIQSRFNQILPFLRGK
LGSSAQKLLKHKWDDENLENGWKNKGEIVQKILRIHLEYTESTADLLDEL
ACTILPQVSCTTMAEDEDYGYPTLCSATFLSWYHVLFEVNLTVLDKLVKE
VVHLEKCRPGFQPENVHTHLIKMQKNVNVVVALVNMCRTYDKVTLHAMAV
KYGGKFIDSFLKAFDFLQVHFQMHNEVIILLVKELQKATRTIQTLCSEAK
GLKQTAITGKIPATKRSLERFLFRVKALLHTTSSGCTFWMGNLKHKDLRG
QVVSSQAYVDDRNDSIDQDPEDVDPPVIVATASGNSETD* back to top
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