Tc01v2_t012990.1

Overview
NameTc01v2_t012990.1
Unique NameTc01v2_t012990.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length963
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 147 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
Productperoxidase P7
NotePeroxidase 4
Cross References
External references for this mRNA
DatabaseAccession
GeneID18612072
GenbankXM_007048662.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc01v2_g012990Tc01v2_g012990Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc01v2_p012990.1Tc01v2_p012990.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto29073auto29073Theobroma cacaoexon
exon-auto29074auto29074Theobroma cacaoexon
exon-auto29075auto29075Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto29076auto29076Theobroma cacaoCDS
CDS-auto29077auto29077Theobroma cacaoCDS
CDS-auto29078auto29078Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc01v2_t012990.1 ID=Tc01v2_t012990.1|Name=Tc01v2_t012990.1|organism=Theobroma cacao|type=mRNA|length=963bp
ATGGCCTTTGTAGTTTCCTATTTCTCACTCTCCCTTATTCTACTTGTGCT
GCTTTCCAGCAGCTCTGCTGCGAATGCTCAGCTGTCTCCCAAATTCTATG
CAAACTCTTGCCCTAACCTTCAAACCATCGTGCGTAATGCAATGACCCAG
GCTGTTAATAGAGAGACGCGAATCGGAGCCTCTATTCTCCGCTTGTTCTT
CCATGACTGCTTTGTCAATGGCTGTGATGCATCCATACTACTGGACGACA
CGGCGACGTTCACAGGCGAAAAGAATGCAGCGCCAAACAGAAACTCAGTT
CGAGGTTTCGAAGTGATTGATACCATAAAGACCAGTGTGGAAGCTGCTTG
CAGTGCCACTGTTTCCTGTGCAGATATCCTAGCACTTGCAGCTAGAGATG
GTGTAGTCCTGCTTAAAGGACCTTCATGGCAAGTACCCCTTGGCCGGAGA
GATGCAAGAACGGCCAGCCAAAGCGCAGCCAACAACCAACTCCCATCACC
ATTCTCCAACCTCTCAGCTCTAACCTCTTCTTTTGCTGCCAAAGGCCTAA
GCGCCCGGGACCTGACTGCGCTATCCGGTGGTCACACCATAGGCCTGGCT
AGATGCACAACATTTCGTGGTCGCATCTACAACGACACCAACATTGATCC
AAATTTTGCAGCCAACAGACGGGCAAACTGCCCTGCTTCTGGCGGTGACA
ACAATCTGGCGCCTCTAGATATACAGACTCCGACCAGGTTCGACAACTAT
TATTTCCGTAACCTTGTGGCTCAAAGAGGGCTGCTTCATTCGGACCAGGA
GCTCTTCAATGGAGGATCCCAGGATGCACTTGTTAGGACCTATAGCACCA
ATCCTGAGGTTTTTTCCAGTGATTTTGCTGCTGCCATGGTCAGGATGGGA
AACATTAGTCCTCTTACTGGGACGAGAGGAGAGATAAGAAGGAACTGCAG
GGTGGTCAACTGA
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protein sequence of Tc01v2_p012990.1

>Tc01v2_p012990.1 ID=Tc01v2_p012990.1|Name=Tc01v2_p012990.1|organism=Theobroma cacao|type=polypeptide|length=321bp
MAFVVSYFSLSLILLVLLSSSSAANAQLSPKFYANSCPNLQTIVRNAMTQ
AVNRETRIGASILRLFFHDCFVNGCDASILLDDTATFTGEKNAAPNRNSV
RGFEVIDTIKTSVEAACSATVSCADILALAARDGVVLLKGPSWQVPLGRR
DARTASQSAANNQLPSPFSNLSALTSSFAAKGLSARDLTALSGGHTIGLA
RCTTFRGRIYNDTNIDPNFAANRRANCPASGGDNNLAPLDIQTPTRFDNY
YFRNLVAQRGLLHSDQELFNGGSQDALVRTYSTNPEVFSSDFAAAMVRMG
NISPLTGTRGEIRRNCRVVN*
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