Tc01v2_t012780.1

Overview
NameTc01v2_t012780.1
Unique NameTc01v2_t012780.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length828
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 17 ESTs, 111 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Product14-3-3-like protein B, transcript variant X1
Note14-3-3-like protein B
Cross References
External references for this mRNA
DatabaseAccession
GeneID18612046
GenbankXM_007048624.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc01v2_g012780Tc01v2_g012780Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc01v2_p012780.1Tc01v2_p012780.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto28590auto28590Theobroma cacaoexon
exon-auto28591auto28591Theobroma cacaoexon
exon-auto28592auto28592Theobroma cacaoexon
exon-auto28593auto28593Theobroma cacaoexon
exon-auto28594auto28594Theobroma cacaoexon
exon-auto28595auto28595Theobroma cacaoexon
exon-auto28596auto28596Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto28597auto28597Theobroma cacaoCDS
CDS-auto28598auto28598Theobroma cacaoCDS
CDS-auto28599auto28599Theobroma cacaoCDS
CDS-auto28600auto28600Theobroma cacaoCDS
CDS-auto28601auto28601Theobroma cacaoCDS
CDS-auto28602auto28602Theobroma cacaoCDS
CDS-auto28603auto28603Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc01v2_t012780.1 ID=Tc01v2_t012780.1|Name=Tc01v2_t012780.1|organism=Theobroma cacao|type=mRNA|length=828bp
ATGGCTTCTTCTAAAGAGCGCGAGAATTTCGTCTACGTCGCCAAGCTCGC
TGAACAGGCTGAGCGCTACGATGAGATGGTGGAGGCTATGAAGAACGTGG
CAAAGCTTGATGTTGAATTGACAGTGGAAGAGAGGAACTTGCTGTCTGTT
GGGTACAAGAATGTGATTGGTGCTCGGAGAGCTTCATGGAGGATTCTTTC
CTCTATAGAGCAAAAGGAAGATGCTAAAGGAAATGAGGTGAATGCAAAGC
GGATCAAGGAGTACAGGCACAAGGTTGAATCTGAGCTCTCAAGCATCTGT
AATGATATTATGACTGTGATTGATGAACATCTCATCCCTTCAGCATCTGC
TGGTGAATCAACTGTCTTCTTCTATAAGATGAAAGCAGATTATTATCGTT
ATCTTGCTGAATTCAAAGCAGGCAATGAGAAGAAAGAGGCTGCTGATCAT
TCTATGAAGGCATATGAGACAGCTACCGCTACTGCAGAGGCTGAGTTGCC
TCCTACACATCCTATCCGTTTGGGTTTAGCCTTGAATTTCTCAGTCTTCT
ATTATGAGATTATGAATACTCCTGAGAGGGCCTGCCATCTTGCCAAGCAA
GCTTTTGATGAAGCTATAGCAGAGCTTGACACCCTCAGTGAGGAGTCTTA
CAAAGACAGCACCTTAATTATGCAGCTTCTAAGGGACAACCTCACCCTTT
GGACTTCTGACATCACAGAGGATCCAGAAGATTCCATGAGGGACTCCACT
GGCAGATCTGGTGCGGGAGATGATGCAGAGCTTGTGATATCGCCTAAGCT
TGCGGGAAATTCTGCCCTTGTGACTTGA
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protein sequence of Tc01v2_p012780.1

>Tc01v2_p012780.1 ID=Tc01v2_p012780.1|Name=Tc01v2_p012780.1|organism=Theobroma cacao|type=polypeptide|length=276bp
MASSKERENFVYVAKLAEQAERYDEMVEAMKNVAKLDVELTVEERNLLSV
GYKNVIGARRASWRILSSIEQKEDAKGNEVNAKRIKEYRHKVESELSSIC
NDIMTVIDEHLIPSASAGESTVFFYKMKADYYRYLAEFKAGNEKKEAADH
SMKAYETATATAEAELPPTHPIRLGLALNFSVFYYEIMNTPERACHLAKQ
AFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDITEDPEDSMRDST
GRSGAGDDAELVISPKLAGNSALVT*
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