Tc01v2_t010860.1

Overview
NameTc01v2_t010860.1
Unique NameTc01v2_t010860.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length3084
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 2 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
Productelongation factor-like GTPase 1
NotePutative Elongation factor 2
Cross References
External references for this mRNA
DatabaseAccession
GeneID18611819
GenbankXM_018114333.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc01v2_g010860Tc01v2_g010860Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc01v2_p010860.1Tc01v2_p010860.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto22858auto22858Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto22859auto22859Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc01v2_t010860.1 ID=Tc01v2_t010860.1|Name=Tc01v2_t010860.1|organism=Theobroma cacao|type=mRNA|length=3084bp
ATGGGTGACTCTGACACGAGAAAGATTAGAAATATATGTATTTTAGCACA
TGTTGATCATGGTAAAACTACATTGGCTGATCATTTGATAGCCGCCACGG
GTGGCGGTGTACTTCACCCTAAACTAGCTGGTAAACTTAGGTATATGGAT
TATCTTGATGAAGAACAGAGGAGAGCGATAACAATGAAGAGTTCTTCCAT
AGCTCTTCATTATAAAGACTACGAGATTAACCTTATAGATTCCCCTGGTC
ATATGGATTTTTGTAGTGAGGTGTCCACAGCTGCGCGGTTGAGTGATGGT
GGATTGGTTTTGGTTGATGCTGTTGAGGGCGTTCATATTCAAACTCATGC
GGTTCTGCGTCAGTCTTGGATAGAGAAGGTTACCCCATGTTTAGTTCTTA
ATAAAATTGATAGGTTGATATGTGAGTTGAAGTTGAGTCCTATAGAAGCT
TATAATCGGTTATTGAGGATCGTTCATGAGGTTAATGGGATCATGAGTAC
ATATAAGTCAGAGAAATATTTGTCTGATGTTGATTCGATACTTGCTGGCC
CTTCTGGTGAGGTGACTGATGAGAATTGGGAGTCTATAGAGGATGATGAG
GAGGATACTTTTCAACCCCAAAAGGGAAATGTTGCGTTTGTGTGTGCATT
GGATGGGTGGGGTTTTACAATTAATGAGTTTGCTGAATTCTATGCTTCTA
AGCTTGGAGCAAGTGCAGCTGCACTGCAAAAGGCCTTTTGGGGTCCTCGA
TATTTCAATCCGAAGACCAAGATGATTGTTGGGAAGAAGGGACTAGGTGT
AGGAAGTAAGGCTCGGCCGATGTTTGTGCAGTTTGTCCTTGAGCCACTTT
GGCAGGTTTACCAGGCTGCTTTGGAGCCTGATGGGGACAAAGGGATGCTT
GAGAAGGTGATTAAATCTTTTAATTTGTCTGTGCCTCCTCGTGAACTGCA
GAATAAGGACCCAAAGATCTTACTTCAAGCTGTCATGAGCAGATGGCTTC
CTTTGTCAGATGCAATTTTGTCAATGGTGGTGAAGTGTCTGCCAGATCCA
ATTGCTGCTCAATCACTTAGAATTTCACGCTTGCTTCCCAAAAGAGAAAT
TCTTGATGAAGGGGTAGACTCTAATGTGCTTGAAGAGGCTGATTTTGTGA
GAAAATCAGTTGAAGCTTGTGATTCTAGCTCTGAAGCACCATGTATTGCA
TTTGTATCTAAAATGTTTGCCATCCCGACAAAGATGCTGCCCCAACGGGG
TCCACATGGGGAGATTTTAAACAATTTCAATGATGAAGGTGGAAGCAGTG
AATCAGATGAGTGCTTCCTTTCATTTGCTAGGATATTTAGTGGGGTTCTT
ACATCAGGACAAAGAGTTTTTGTGCTTTCAGCTTTATATGATCCATTGAG
AGGGGAATCAATGCAGAAGCATGTGCAGGAAGCTGAATTGCATTCCTTAT
ATTTAATGATGGGTCAAGGTCTGAAACCAGTGGCCTCGGCAAGGGCAGGG
AATATTGTGGCAATCCGTGGACTTGGTCAGCATATACTAAAGAGTGCAAC
TCTTTCATCCACAAGAAACTGTTGGCCGTTCTCAAGTATGGCTTTCCAAG
TTGCCCCCACCCTGAGGGTTGCAATTGAACCATCTGATCCAGCAGACATG
GGTGCTCTTATGAAAGGACTGAGGCTTCTGAATCGAGCAGATCCATTTGT
GGAGGTCACTGTTTCATCTAGAGGGGAACATGTGTTAGCTGCTGCTGGGG
AGGTTCATCTAGAAAGATGTGTAAAAGATTTGAAGGAGAGATTTGCAAAG
GTGAGCCTGGAAGTCTCTCCACCTCTTGTGTTGTATAAAGAGACCATTGA
GGGTGATTTATCTAATCCATTGGAGGATTTGAAAAGATTGAGTGCTAGCT
CAGATTATGTTGAAAAAATGACTCCAAATGGAAGATGTGTCATCCGCGTT
CAAGTCATGAAACTTCCACCTACACTAACCAAGGTGCTTGATGAAAGTGC
TGATTTGCTCTCAGATATTATTGGAGGTAAACCAGGGCAGAGTGGTAAAG
GCTTGGAAATACATAGATCGAACGTGAGGGAAGATGAGAATCCAATTGAA
GTACTCAGTAAACGCATAGTTGATACTCTGGAGGGTGATATTTTGTGTGG
AAATGAAAATGACAAGGATCAGTCTGAGAAATGCAAAGGTGAGTGGCTTA
AGTTTCTTAGGAGGATCTGGGCACTTGGTCCAAGGCAGGTTGGTCCTAAC
ATCCTCTTCACTCCAGATTACAAAAGGAAGAATAATGATGGCTCTGTTCT
GATATGTGGTTCCCCTCATGTATCTCTAAGATTGGGGTTTGCTGACAATT
CTAGTGCTGGTGATATGGCTGCTGTGCAATCTTCAGAAGTAACTCAACCA
CTCTACATAGAGGTGGAGAGTCTTGAAAGTAGTGTGATGTCTGGATTTGA
ACTAGCTACTGCAGCTGGCCCCTTATGTGATGAACCAATGTGGGGACTAG
CATTTGTTGTTGAAGCTTATATCTCTTCCTCAACTGGGCAGGCCAGTGAA
TCAGAACCTAACCAACAACCTGAGCAGTATGGTCTCTTTACTGGACAGGT
AATGACAGCAGTCAAGGATGCCTGTAGAGCAGCTGTGCTTCAGAGGAAAC
CTCGGCTTGTTGAAGCCATGTACTTTTGCGAGTTGAATACTCCAACTGAA
TATTTGGGCCCTATGTATGCTGTGCTTGCTCGGAGGCGAGCCCGAGTGTT
GAAGGAAGAAATGCAGGAAGGCTCTCCACTTTTTACTGTGCATGCTTATG
TGCCAGTTTCTGAAAGTTTTGGTTTTGCTGATGAGTTAAGGAGATGGACA
TCTGGGGCTTCTAGTGCACTTCTTGTGCTTAGCCATTGGGAAGCACTTCC
TGAGGATCCTTTTTTTGTACCCAAAACAGAAGAGGAGATAGAAGAGTTTG
GAGATGGTTCTAGTGTTCTTCCAAATACGGCAAGAAAGCTCATTGATGCC
GTGAGGAGGCGGAAGGGTCTCCGTGTAGAAGAAAAAGTAGTTCAGCATGC
AACAAAGCAGAGGACACTAGCTCGTAAAGTGTAA
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protein sequence of Tc01v2_p010860.1

>Tc01v2_p010860.1 ID=Tc01v2_p010860.1|Name=Tc01v2_p010860.1|organism=Theobroma cacao|type=polypeptide|length=1028bp
MGDSDTRKIRNICILAHVDHGKTTLADHLIAATGGGVLHPKLAGKLRYMD
YLDEEQRRAITMKSSSIALHYKDYEINLIDSPGHMDFCSEVSTAARLSDG
GLVLVDAVEGVHIQTHAVLRQSWIEKVTPCLVLNKIDRLICELKLSPIEA
YNRLLRIVHEVNGIMSTYKSEKYLSDVDSILAGPSGEVTDENWESIEDDE
EDTFQPQKGNVAFVCALDGWGFTINEFAEFYASKLGASAAALQKAFWGPR
YFNPKTKMIVGKKGLGVGSKARPMFVQFVLEPLWQVYQAALEPDGDKGML
EKVIKSFNLSVPPRELQNKDPKILLQAVMSRWLPLSDAILSMVVKCLPDP
IAAQSLRISRLLPKREILDEGVDSNVLEEADFVRKSVEACDSSSEAPCIA
FVSKMFAIPTKMLPQRGPHGEILNNFNDEGGSSESDECFLSFARIFSGVL
TSGQRVFVLSALYDPLRGESMQKHVQEAELHSLYLMMGQGLKPVASARAG
NIVAIRGLGQHILKSATLSSTRNCWPFSSMAFQVAPTLRVAIEPSDPADM
GALMKGLRLLNRADPFVEVTVSSRGEHVLAAAGEVHLERCVKDLKERFAK
VSLEVSPPLVLYKETIEGDLSNPLEDLKRLSASSDYVEKMTPNGRCVIRV
QVMKLPPTLTKVLDESADLLSDIIGGKPGQSGKGLEIHRSNVREDENPIE
VLSKRIVDTLEGDILCGNENDKDQSEKCKGEWLKFLRRIWALGPRQVGPN
ILFTPDYKRKNNDGSVLICGSPHVSLRLGFADNSSAGDMAAVQSSEVTQP
LYIEVESLESSVMSGFELATAAGPLCDEPMWGLAFVVEAYISSSTGQASE
SEPNQQPEQYGLFTGQVMTAVKDACRAAVLQRKPRLVEAMYFCELNTPTE
YLGPMYAVLARRRARVLKEEMQEGSPLFTVHAYVPVSESFGFADELRRWT
SGASSALLVLSHWEALPEDPFFVPKTEEEIEEFGDGSSVLPNTARKLIDA
VRRRKGLRVEEKVVQHATKQRTLARKV*
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