Tc01v2_t009480.1

Overview
NameTc01v2_t009480.1
Unique NameTc01v2_t009480.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1770
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
Productgamma-glutamyltranspeptidase 1, transcript variant X2
NoteGamma-glutamyltranspeptidase 1
Cross References
External references for this mRNA
DatabaseAccession
GeneID18611652
GenbankXM_007048019.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc01v2_g009480Tc01v2_g009480Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc01v2_p009480.1Tc01v2_p009480.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto20322auto20322Theobroma cacaoexon
exon-auto20323auto20323Theobroma cacaoexon
exon-auto20324auto20324Theobroma cacaoexon
exon-auto20325auto20325Theobroma cacaoexon
exon-auto20326auto20326Theobroma cacaoexon
exon-auto20327auto20327Theobroma cacaoexon
exon-auto20328auto20328Theobroma cacaoexon
exon-auto20329auto20329Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto20330auto20330Theobroma cacaoCDS
CDS-auto20331auto20331Theobroma cacaoCDS
CDS-auto20332auto20332Theobroma cacaoCDS
CDS-auto20333auto20333Theobroma cacaoCDS
CDS-auto20334auto20334Theobroma cacaoCDS
CDS-auto20335auto20335Theobroma cacaoCDS
CDS-auto20336auto20336Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc01v2_t009480.1 ID=Tc01v2_t009480.1|Name=Tc01v2_t009480.1|organism=Theobroma cacao|type=mRNA|length=1770bp
ATGAAGAACCACAGAAGAGAGAAGAAAATGTCATTTGTGCCATTGTTATG
GACCACCATTTTATTTCTCTTCTTTATTGTGTCCCCTGCTACTTCAAGCC
TGGATGGAGTAAGTGCTTCTACCAAACAGAGACGTGAGGAGATTGTTGCG
CGTCATGGTGCAGTTGCTACTGATGATGGCCGGTGTTCGAAAATCGGGAT
GGATGTTCTTCGGATTGGCGGTCATGCTGTTGATGCAGCAGTGGCTGCTG
CGCTTTGCTTGGGCGTTGTAAGCCCAGCATCAAGTGGCATAGGTGGAGGA
GCCTTCATGCTTGTCAGGGAATCTAATGGGAAGGCACAAGCATTCGATAT
GAGAGAAACAGCTCCAATGAAAGCTTCCCAGAATATGTATGCTGGCAATG
CTACTCTAAAGGCTAGCGGTGCCCTCTCTGTAGCTGTGCCAGGGGAACTT
GCAGGCCTTCACAAAGCATGGAAAGAACATGGAAGGCTTCCATGGGCAAG
GCTTGTGAAGCCAGCCGAGAATCTTGCTCGGAAAGGATTCAAAGTTTCAC
CATATCTCCAGATGCAGATGGAAAGTACAAAGTCAGCAATCTTGGCAGAT
AAGGGGCTCCGTGACATCTTCACATCAAATGGCGAGCTTTTGCAAGTAGG
TGACATCTGTTACAATAAGAAACTAGCAGAAACTCTTCGAAAGATTTCAA
TATACGGTGTGGATGCTTTCTATAATGGGTCGATTGGATTTAATTTGGTA
AGAGATATTCAGAAAGCTGGAGGGATACTGACAGTGGATGACCTGAAAAA
GTATGAAGTTAAAATGAGGGAACCAATCTCGGCTAATATTCTGGGCCTTA
AAATTCTTGGCATGCCACCTCCTTCCTCAGGGGGTGCTTCAATGATGCTT
GTACTCAACATTCTTGCTCAATATGGAGTCCCTTCCGGTATTTTAGGTTC
ACTTGGAACCCATAGACTCATTGAAGCTTTGAAACATGCATTTGCGGTGA
GGATGAATCTGGGTGATCCTGATTTTGTGGATGTTTCTAAAGTTGTAGCG
GATATGCTCTCTCCGAAGTTTGCAGAGGAGTTGAAGAAAACCATTTATGA
CAACATGACTTTTGGCCCCGGTCACTATGGTGGAAGGTGGAACCAAATCC
ATGATCACGGCACCAGCCATGTCGCCATTGTTGATATCAAGCGAAATGCT
GTATCAATGACTAATACAGTGAATGCATACTTCGGTTCAAAAATTCTGTC
ACCAAGTACAGGAATAGTTCTCAATAATGAAATGGATGACTTCTCCATGC
CCACAAATAGCTCTGGAAATACTCCACCCCCAGCACCACCCAATTTCGTC
CGCCCTGGCAAAAGGCCCTTGTCATCCATGACACCTACAATAGTACTGAA
GGATGAGAGGCTGAGTGGTGTGGTGGGTGCAAGTGGAGGAGCTAATATCA
TTGCAGGGACTACAGGGGTTTTCTTGAACCATTTTGCTCGGGGGATGGAT
CCTCTCTCTTCTGTCATGGCACCAAGGATCTACCATCAGCTGATACCCAA
CGTGGTGACATATGAGAACTGGACAACTGTTATTAGAGACCATTTTGAAG
TTCCTGCACATATCAGGAGAGACCTTCAAAAGAAGGGTCATGTACTACAG
GGCCTAGCCGGTGGGACTATCTGCCAATTTATAGTTCATAAATTAGATGC
TTTGAAGGGAAATGGAGGCCTTGTAGCAGTTAGTGACCCAAGAAAAGGAG
GGTTCCCTGCCGGTTTCTGA
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protein sequence of Tc01v2_p009480.1

>Tc01v2_p009480.1 ID=Tc01v2_p009480.1|Name=Tc01v2_p009480.1|organism=Theobroma cacao|type=polypeptide|length=590bp
MKNHRREKKMSFVPLLWTTILFLFFIVSPATSSLDGVSASTKQRREEIVA
RHGAVATDDGRCSKIGMDVLRIGGHAVDAAVAAALCLGVVSPASSGIGGG
AFMLVRESNGKAQAFDMRETAPMKASQNMYAGNATLKASGALSVAVPGEL
AGLHKAWKEHGRLPWARLVKPAENLARKGFKVSPYLQMQMESTKSAILAD
KGLRDIFTSNGELLQVGDICYNKKLAETLRKISIYGVDAFYNGSIGFNLV
RDIQKAGGILTVDDLKKYEVKMREPISANILGLKILGMPPPSSGGASMML
VLNILAQYGVPSGILGSLGTHRLIEALKHAFAVRMNLGDPDFVDVSKVVA
DMLSPKFAEELKKTIYDNMTFGPGHYGGRWNQIHDHGTSHVAIVDIKRNA
VSMTNTVNAYFGSKILSPSTGIVLNNEMDDFSMPTNSSGNTPPPAPPNFV
RPGKRPLSSMTPTIVLKDERLSGVVGASGGANIIAGTTGVFLNHFARGMD
PLSSVMAPRIYHQLIPNVVTYENWTTVIRDHFEVPAHIRRDLQKKGHVLQ
GLAGGTICQFIVHKLDALKGNGGLVAVSDPRKGGFPAGF*
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