Tc01v2_t009120.1

Overview
NameTc01v2_t009120.1
Unique NameTc01v2_t009120.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1533
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 67 ESTs, 58 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productinositol-3-phosphate synthase
NoteInositol-3-phosphate synthase
Cross References
External references for this mRNA
DatabaseAccession
GeneID18611610
GenbankXM_007047953.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc01v2_g009120Tc01v2_g009120Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc01v2_p009120.1Tc01v2_p009120.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto19222auto19222Theobroma cacaoexon
exon-auto19223auto19223Theobroma cacaoexon
exon-auto19224auto19224Theobroma cacaoexon
exon-auto19225auto19225Theobroma cacaoexon
exon-auto19226auto19226Theobroma cacaoexon
exon-auto19227auto19227Theobroma cacaoexon
exon-auto19228auto19228Theobroma cacaoexon
exon-auto19229auto19229Theobroma cacaoexon
exon-auto19230auto19230Theobroma cacaoexon
exon-auto19231auto19231Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto19232auto19232Theobroma cacaoCDS
CDS-auto19233auto19233Theobroma cacaoCDS
CDS-auto19234auto19234Theobroma cacaoCDS
CDS-auto19235auto19235Theobroma cacaoCDS
CDS-auto19236auto19236Theobroma cacaoCDS
CDS-auto19237auto19237Theobroma cacaoCDS
CDS-auto19238auto19238Theobroma cacaoCDS
CDS-auto19239auto19239Theobroma cacaoCDS
CDS-auto19240auto19240Theobroma cacaoCDS
CDS-auto19241auto19241Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc01v2_t009120.1 ID=Tc01v2_t009120.1|Name=Tc01v2_t009120.1|organism=Theobroma cacao|type=mRNA|length=1533bp
ATGTTTATTGAGAGCTTTAAGGTAGAGAGCCCAAATGTGAAGTACACAGA
CAATGAGATTCTGTCGGTGTACAACTATGAGACCACCGAGCTTGTTCATG
AGAACAGGAATGGAACCTATCAATGGGTTGTAAAACCTAAGACCGTCAAA
TATGAATTCAAGACTGATACCCATGTCCCTAAACTAGGGGTGATGCTTGT
GGGATGGGGAGGAAACAATGGTTCGACTCTGACTGGTGCTGTTATAGCCA
ACCGAGAGGGAATCTCCTGGGCCACTAAGGACAAGGTGCAACAAGCCAAT
TACTTTGGTTCTCTTACTCAAGCATCAACAATCAGAGTTGGATCTTACAA
TGGAGAGGAGATTTATGCCCCATTTAAGAGCCTTCTCCCCATGGTGAACC
CAGAGGATATTGTGTTTGGAGGGTGGGACATAAGTGACATGAACCTAGCT
GATGCAATGGCTAGGGCCAAGGTTTTTGATATTGATTTGCAGAAGCAGCT
GAGGCCCTACATGGAATCCACGGTCCCACTCCCTGGAATCTACGACCCGG
ATTTCATTGCTGCCAACCAAGGTGAACGTGCCAACAACATCATCAAGGGG
ACCAAGAAAGAACAAGTTCAGCAAATCATCAAAGATATTAGGGAGTTCAA
GGAGAAAAACAAGGTGGACAGGGTGGTTGTACTCTGGACTGCGAACACTG
AGAGGTACAGCAATGTAATTGTAGGTCTAAACGACACCATGGAGAGCCTC
TTGGGTTCTTTGGAGAAGAATGAATCAGAAATATCTCCTTCCACTTTGTA
CGCCATCGCTAGTGTTCTTGAAAATGTTCCCTTCATCAATGGAAGCCCAC
AAAACACCTTTGTTCCAGGGTTAATTGATTTGGCTATTCAGAGGAACTGC
CTGATTGGAGGAGATGACTTTAAGAGTGGCCAGACCAAGATGAAATCTGT
TCTGGTGGATTTCCTTGTTGGGGCTGGCATCAAGCCAACATCAATAGTGA
GCTACAACCATCTTGGAAACAATGATGGCATGAATCTATCAGCTCCCCAA
ACCTTCCGCTCCAAGGAGATCTCCAAGAGCAACGTTGTTGATGACATGGT
CTCGAGCAATGGTATCCTCTATGAGCCTGGTGAACATCCTGACCATGTTG
TGGTCATCAAGTATGTGCCATATGTGGGAGATAGCAAGAGAGCCATGGAT
GAGTACACATCAGAGATATTCATGGGAGGCCAGAACACCATTGTGTTGCA
CAACACATGCGAGGACTCCCTGTTGGCTGCTCCCATCATCCTGGATTTGG
TTCTTCTTGCTGAGCTCAGCACCAGGATCCAGCTCAAAGCTGAAGGAGAG
GGCAAGTTCCACTCTTTCCACCCTGTGGCTACTATCCTCAGTTACCTCAC
CAAGGCCCCTCTTGTTCCACCAGGGACAGCAGTGGTGAATGCACTGTCAA
AGCAGCGTGCAATGCTGGAGAATATACTGAGGGCCTGCATTGGCTTGGCT
CCTGAAAACAACATGATCTTGGAATACAAGTGA
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protein sequence of Tc01v2_p009120.1

>Tc01v2_p009120.1 ID=Tc01v2_p009120.1|Name=Tc01v2_p009120.1|organism=Theobroma cacao|type=polypeptide|length=511bp
MFIESFKVESPNVKYTDNEILSVYNYETTELVHENRNGTYQWVVKPKTVK
YEFKTDTHVPKLGVMLVGWGGNNGSTLTGAVIANREGISWATKDKVQQAN
YFGSLTQASTIRVGSYNGEEIYAPFKSLLPMVNPEDIVFGGWDISDMNLA
DAMARAKVFDIDLQKQLRPYMESTVPLPGIYDPDFIAANQGERANNIIKG
TKKEQVQQIIKDIREFKEKNKVDRVVVLWTANTERYSNVIVGLNDTMESL
LGSLEKNESEISPSTLYAIASVLENVPFINGSPQNTFVPGLIDLAIQRNC
LIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQ
TFRSKEISKSNVVDDMVSSNGILYEPGEHPDHVVVIKYVPYVGDSKRAMD
EYTSEIFMGGQNTIVLHNTCEDSLLAAPIILDLVLLAELSTRIQLKAEGE
GKFHSFHPVATILSYLTKAPLVPPGTAVVNALSKQRAMLENILRACIGLA
PENNMILEYK*
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