Tc01v2_t008350.1

Overview
NameTc01v2_t008350.1
Unique NameTc01v2_t008350.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length972
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 32 ESTs, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
Productperoxidase 17
NotePeroxidase 17
Cross References
External references for this mRNA
DatabaseAccession
GeneID18611523
GenbankXM_007047814.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc01v2_g008350Tc01v2_g008350Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc01v2_p008350.1Tc01v2_p008350.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto17986auto17986Theobroma cacaoexon
exon-auto17987auto17987Theobroma cacaoexon
exon-auto17988auto17988Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto17989auto17989Theobroma cacaoCDS
CDS-auto17990auto17990Theobroma cacaoCDS
CDS-auto17991auto17991Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc01v2_t008350.1 ID=Tc01v2_t008350.1|Name=Tc01v2_t008350.1|organism=Theobroma cacao|type=mRNA|length=972bp
ATGATGTCTCTCCTTCCTTCACTCTTTCTCCTACTAGTGACCATGGCCGC
TGCAATCCCTCTCCGGCCTGGTTTCTACTCTGAAACATGTCCACCAGCGG
AAGTCATAGTCAGAGATGTGATGAGGAAAGCCATGATTAGGGAGCCAAGA
AGCGTTGCCTCGGTCATGCGCTTTCAATTCCATGATTGCTTTGTTGATGG
CTGTGATGCTTCTTTGCTGCTAGATGATACACCAAACATGACAGGGGAAA
AGCTAGCTCTTTCCAATATAAATTCGCTAAGATCCTTCGAAGTAATCGAT
GAGGTCAAGGAAGCCTTGGAGAAGGCCTGTCCAGGAACAGTTTCTTGTGC
AGATATCGTAATCATGGCCGCCAGGGATGCTGTTGCTCTGACTGGAGGAC
CTGATTGGATAGTGAGGCTGGGAAGAAAAGATAGCTTAACAGCAAGTCAA
GAAGACTCAGACAACATAATGCCAAGCCCAAGAGCAAATGCAAGTTTTCT
CATTGATCTCTTCAGCCAATTCAACCTATCTGTCAAGGATCTTGTAGCCC
TTTCTGGATCACACTCAATCGGCGAAGGAAGGTGCTTCTCAATAATGTTC
AGGCTCTACAACCAATCTGGCTCAGGCAAGCCCGACCCTGCCATTGAACC
AAGGTTTAGAGAAAAGCTAGACAAGCTTTGTCCGCTTGGTGGAGATGAAA
ATGTAACAGGTGATCTTGATGCAACACCAAGATTGTTTGATAACCAATAC
TTCAAGGACTTGGTTGCAGGGAGAGGATTTCTGAATTCGGATCAAACGCT
TTTCACATTTCCTCAGACTAGAAAATATGTCAAGCTTTTTAGCGAAGACC
AGAATGCGTTTTTTAATGCCTTTGTTGAGGGAATGTTGAAAATGGGTGAC
TTGCAGTCCGGGCGGCCTGGTGAGGTTAGAACCAATTGTAGGGTGGCCAA
TAGCCGGCCAGTGGATGTATGA
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protein sequence of Tc01v2_p008350.1

>Tc01v2_p008350.1 ID=Tc01v2_p008350.1|Name=Tc01v2_p008350.1|organism=Theobroma cacao|type=polypeptide|length=324bp
MMSLLPSLFLLLVTMAAAIPLRPGFYSETCPPAEVIVRDVMRKAMIREPR
SVASVMRFQFHDCFVDGCDASLLLDDTPNMTGEKLALSNINSLRSFEVID
EVKEALEKACPGTVSCADIVIMAARDAVALTGGPDWIVRLGRKDSLTASQ
EDSDNIMPSPRANASFLIDLFSQFNLSVKDLVALSGSHSIGEGRCFSIMF
RLYNQSGSGKPDPAIEPRFREKLDKLCPLGGDENVTGDLDATPRLFDNQY
FKDLVAGRGFLNSDQTLFTFPQTRKYVKLFSEDQNAFFNAFVEGMLKMGD
LQSGRPGEVRTNCRVANSRPVDV*
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