Tc01v2_t007870.6

Overview
NameTc01v2_t007870.6
Unique NameTc01v2_t007870.6
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length2943
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
ProductGPI ethanolamine phosphate transferase 2, transcript variant X2
NoteAlkaline-phosphatase-like family protein, putative
Cross References
External references for this mRNA
DatabaseAccession
GeneID18611470
GenbankXM_018119793.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc01v2_g007870Tc01v2_g007870Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc01v2_p007870.6Tc01v2_p007870.6Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto17061auto17061Theobroma cacaoexon
exon-auto17062auto17062Theobroma cacaoexon
exon-auto17063auto17063Theobroma cacaoexon
exon-auto17064auto17064Theobroma cacaoexon
exon-auto17065auto17065Theobroma cacaoexon
exon-auto17066auto17066Theobroma cacaoexon
exon-auto17067auto17067Theobroma cacaoexon
exon-auto17068auto17068Theobroma cacaoexon
exon-auto17069auto17069Theobroma cacaoexon
exon-auto17070auto17070Theobroma cacaoexon
exon-auto17071auto17071Theobroma cacaoexon
exon-auto17072auto17072Theobroma cacaoexon
exon-auto17073auto17073Theobroma cacaoexon
exon-auto17074auto17074Theobroma cacaoexon
exon-auto17075auto17075Theobroma cacaoexon
exon-auto17076auto17076Theobroma cacaoexon
exon-auto17077auto17077Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto17078auto17078Theobroma cacaoCDS
CDS-auto17079auto17079Theobroma cacaoCDS
CDS-auto17080auto17080Theobroma cacaoCDS
CDS-auto17081auto17081Theobroma cacaoCDS
CDS-auto17082auto17082Theobroma cacaoCDS
CDS-auto17083auto17083Theobroma cacaoCDS
CDS-auto17084auto17084Theobroma cacaoCDS
CDS-auto17085auto17085Theobroma cacaoCDS
CDS-auto17086auto17086Theobroma cacaoCDS
CDS-auto17087auto17087Theobroma cacaoCDS
CDS-auto17088auto17088Theobroma cacaoCDS
CDS-auto17089auto17089Theobroma cacaoCDS
CDS-auto17090auto17090Theobroma cacaoCDS
CDS-auto17091auto17091Theobroma cacaoCDS
CDS-auto17092auto17092Theobroma cacaoCDS
CDS-auto17093auto17093Theobroma cacaoCDS
CDS-auto17094auto17094Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc01v2_t007870.6 ID=Tc01v2_t007870.6|Name=Tc01v2_t007870.6|organism=Theobroma cacao|type=mRNA|length=2943bp
ATGCCGCCACTCACCTGCACCAAACTGGCTTTGATCACTCTAACCGGAGT
CATCATTCAAATCATTGGCCTTTCTCTTTTCGTCTTCGGCTTTTTTCCCG
TCAAACCGGCTCTCACCGGCACCAGTGGCTCGGAGAGTTTCCACTTACCT
ATTTGCAACTCAGTTGGGAATCAAAGCGAAACGACTCTGCCGTCCGATCA
ACTCAGATCGTTATATAAAGAATTGTCGGGGATTCCTTCTTTATTTGATA
GGCTAATTTTAATGGTTATTGATGGTCTTCCAGCAGAATTCGTGCTTGGC
AAGAATGGGAAACCTCCTAGTAAGCAATTTTTGGAAGCTATGCCTTATAC
TCAGTCATTGCTAGCCAGTGGATTGGCTGTTGGTTACCATGCTAAGGCCG
CCCCTCCAACTGTCACAATGCCTAGATTGAAGGCTATGGTGTCCGGTGCA
ATTGGAGGATTCTTGGATGTGGCATTCAATTTTAACACACAGGCTATGTT
GGACGACAATCTTCTTGGCCAGTTTTTCAGGATTGGTTGGGAAATGGTGA
TGCTTGGTGATGAAACATGGCTGAAGTTGTTTCCTGGGGTATTCAAAAGG
CATGACGGTGTTAGCAGCTTCTATGTTAAGGATACCGTGCAAGTAGATCA
AAATGTTTCGCGACATTTGGGAGATGAGCTTAGTAGAGATGACTGGAATC
TTATGATTCTGCATTATCTAGGCTTGGATCATGTTGGACATATCGGTGGC
CGGAGCAGTATGTTGATGGCCCCAAAGCTAAAGGAGATGGATGAGGTGGT
GAAGTTGATTCATTCAAGTACCACTCAGTCCCAAGGAAATGCCAGAGGGC
GGACACTTTTGATGGTAGTAAGTGATCATGGCATGACAGAAAATGGTAAT
CATGGGGGTTCTTCATATGAAGAAACTGACTCCTTAGCTCTTTTTATTGG
CCTGAGGAATCATGTCTTTGACTATGCATCAGTCATTCACCAGGTTGACA
TTGCACCCACCTTGGCTCTTCTATTTGGTATGCCAATCCCTAAGAACAAT
GTTGGTGTTCTTATTACAGAAGCTTTTGATTCTCTAAAAGAGGACCAACG
TCTGAGGGCTCTGGAGTTAAATTCTTGGCAGTTGCTCAGATTGTTGCAAG
CTCAGTTATCAGGTTTACCATGCAGAAATTTCCCCTGTGATGTATTCAGT
AATCATCAGAGTTCTGGTCCTAGTGAGTGCAATCATAGTGCAGCGAATAT
GCTTTGTTGCTTGTATATGGAAGCGGAAGCTCTACACAGCTCCTTGAAGT
CTAAGGGGGGCTCTGAGTTTGCTAGCAACAAAGAGTACAGCAGGACTGCA
GCAGCATATTACAAGTTTCTGAAATCTGCAAGTGAGTGGTTATCACGCAG
ATCCACTGATAAACCTGTTAAGCTACTTGCTGTTGGACTAGCAACAATGT
TTATCTCATGTGTAATATTATCAAGCCTGATGTTTTGTTGGGTTAGAGAA
ATTTATCTGGGAGGAAAGCGACAGCCCTCCAACTTAAATGATAGCATGAA
TGGCTGGTCTTTAGATGAGACATTCATTCTTGGTGTTATCTTGATCCTTG
TTACAAGTATGGGATCAAGTTCTATGGTAGAGGAAGAGCATTACATATGG
TATTTTGTGGTATCCACATTCTATCTCTTACTACTCCGTAAAACAGCACA
GTCCCTTGCACCAGTTGGTGTCCAAAGTTCTCTTGGCATTCACAAAGTAC
TAAGTGGAAAAGTTTATTCTAGAATGTGTTTAATCTTTTTGCTGCTTATC
TCCGGAAGGATTTTGAGAGGCTGGCATCAAGGTGGTGTAAACTGGACTAC
TCTACCTGACATTTCTAAATGGCTTGAACTGGCTGGGAGTCATTATGTGA
AATTGCTTCAGCTAATATCTGCATTCCTGGTGATCAGCATAGGTGTATGT
GCTCTATTTTCAATAGAATCAAAGGGAAAATTTTTTCAGATGGTCAGACT
TAGCTTTCTGATGTCTGCATTGCTGGTTTTGTTGCATATCATAAGATATC
AGGATTATACATTTTCGTCAACTAATTATGGAGCTACCTTATTGGCACAA
ATAATCTATGCAATTCTTGGTGCTGCGACTATGGGGATTGTTGTGGCCTT
GCCATGGCTTATTCCTTTTTCAACCTTTAAGATTTGCCCTACTGATAATA
CCCTCTCACCTACTTCATTTTTTCTTAGCATTCAAGAGAAGTTTCCGTTG
GTGGAATTAAGAGATTCTTTATATGTGATTGGGTGGTCATACATATATTG
TTGGTGTCTTCTGCAGCTGTTGCTCCAACAGCCAATTAACTCAACACCCA
TACTATTGCTGCTTGTGCAAATATTGGCCAGCTTGCTCTATTTTGCTAGT
AATGGAACCCAATATAAAGAGTGGATAGAGATTGCAGCATTGTACTACTT
GGGAATGGCTGGTCATTTTGCTCTAGGAAATAGCAATACACTTGCTACTA
TTGATGTTGCTGGAGCTTTCATTGGCATATCAAGTCACTCAACATTGCTG
TCTGGCGTTCTAATGTTTATTATCACCTATGCGTCCCCCATGTTTATTCT
TCTTAGCCTGGTAATGTACATCTCTATGAAGAATACTGCCCATCTTGTAA
TTCCTGAGAAAGCAGATGCTGGAGACCTTCTCACGATGATGCTTGGTTTT
CCTTGCCTCGTTCCTCTGGTCTTCAATTCAATTCTGTTGACTGCGTACAC
AGTTGTATTGCTGTTGATGAGGAATCATTTATTTGTTTGGAGTGTTTTCT
CACCCAAGTACCTGTATGTCTGTGCAACAACCCTATGCACTTACATAGGG
GTCTCCATTGTGGCTGCAACTGGAATTTATACACATTTGGTACTGGGCAT
CCGGAAAAGAAAGCAAGTACCAATCAGCAACAACACAAGATAG
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protein sequence of Tc01v2_p007870.6

>Tc01v2_p007870.6 ID=Tc01v2_p007870.6|Name=Tc01v2_p007870.6|organism=Theobroma cacao|type=polypeptide|length=981bp
MPPLTCTKLALITLTGVIIQIIGLSLFVFGFFPVKPALTGTSGSESFHLP
ICNSVGNQSETTLPSDQLRSLYKELSGIPSLFDRLILMVIDGLPAEFVLG
KNGKPPSKQFLEAMPYTQSLLASGLAVGYHAKAAPPTVTMPRLKAMVSGA
IGGFLDVAFNFNTQAMLDDNLLGQFFRIGWEMVMLGDETWLKLFPGVFKR
HDGVSSFYVKDTVQVDQNVSRHLGDELSRDDWNLMILHYLGLDHVGHIGG
RSSMLMAPKLKEMDEVVKLIHSSTTQSQGNARGRTLLMVVSDHGMTENGN
HGGSSYEETDSLALFIGLRNHVFDYASVIHQVDIAPTLALLFGMPIPKNN
VGVLITEAFDSLKEDQRLRALELNSWQLLRLLQAQLSGLPCRNFPCDVFS
NHQSSGPSECNHSAANMLCCLYMEAEALHSSLKSKGGSEFASNKEYSRTA
AAYYKFLKSASEWLSRRSTDKPVKLLAVGLATMFISCVILSSLMFCWVRE
IYLGGKRQPSNLNDSMNGWSLDETFILGVILILVTSMGSSSMVEEEHYIW
YFVVSTFYLLLLRKTAQSLAPVGVQSSLGIHKVLSGKVYSRMCLIFLLLI
SGRILRGWHQGGVNWTTLPDISKWLELAGSHYVKLLQLISAFLVISIGVC
ALFSIESKGKFFQMVRLSFLMSALLVLLHIIRYQDYTFSSTNYGATLLAQ
IIYAILGAATMGIVVALPWLIPFSTFKICPTDNTLSPTSFFLSIQEKFPL
VELRDSLYVIGWSYIYCWCLLQLLLQQPINSTPILLLLVQILASLLYFAS
NGTQYKEWIEIAALYYLGMAGHFALGNSNTLATIDVAGAFIGISSHSTLL
SGVLMFIITYASPMFILLSLVMYISMKNTAHLVIPEKADAGDLLTMMLGF
PCLVPLVFNSILLTAYTVVLLLMRNHLFVWSVFSPKYLYVCATTLCTYIG
VSIVAATGIYTHLVLGIRKRKQVPISNNTR*
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