Tc01v2_t007510.1

Overview
NameTc01v2_t007510.1
Unique NameTc01v2_t007510.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1083
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 10 ESTs, 80 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
Productprobable mannitol dehydrogenase
NoteProbable mannitol dehydrogenase
Cross References
External references for this mRNA
DatabaseAccession
GeneID18611430
GenbankXM_018126044.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc01v2_g007510Tc01v2_g007510Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc01v2_p007510.1Tc01v2_p007510.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto16170auto16170Theobroma cacaoexon
exon-auto16171auto16171Theobroma cacaoexon
exon-auto16172auto16172Theobroma cacaoexon
exon-auto16173auto16173Theobroma cacaoexon
exon-auto16174auto16174Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto16175auto16175Theobroma cacaoCDS
CDS-auto16176auto16176Theobroma cacaoCDS
CDS-auto16177auto16177Theobroma cacaoCDS
CDS-auto16178auto16178Theobroma cacaoCDS
CDS-auto16179auto16179Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc01v2_t007510.1 ID=Tc01v2_t007510.1|Name=Tc01v2_t007510.1|organism=Theobroma cacao|type=mRNA|length=1083bp
ATGACCAGATTGCCAGAAGAAGAGCACCCCAACAAGGCTTTTGGATGGGC
AGCCAGAGACACTTCCGGTGTTCTCTCTCCCTTTAAATTTTCTAGAAGGG
CAACAGGAGAAAAGGATGTGGCTTTCAAGGTGCTTTATAGTGGGATATGC
CACTCAGATCTTCATATGGTCAAGAATGAATGGGGCAGTTCCGTCTACCC
TCTTGTCCCTGGGCATGAGATTGTTGGTGAAGTGACAGCGGTGGGCAGTA
AGGTACAAAAGTTCAAAGTTGGGGACAGAGTTGGAGTGGGGTGCATGGTT
GGATCTTGCCAGTCCTGCGATAGCTGTACCAACAAACTCGAGAACTACTG
CCCGAAAATGATACTTACCTACGGGGCAAAGTACTATGATGGAACTATTA
CATATGGAGGCTACTCCAACAATATGGTTGCTGATGAGCACTTTATAGTC
CGCATTCCTGACAACTTGCCTCTTGATGCTGCGGCTCCTCTTCTTTGTGC
TGGAATCACAGTTTATAGTCCATTGAGATATTACGGACTTGATAAGCCTG
ACTTGCATGTAGGTGTGGTTGGCCTGGGAGGGCTAGGCCATGTGGCAGTG
AAATTTGCCAAGGCTATGGGGGCCAAGGTTACTGTGATCAGCACCTCTCC
TAACAAGAAGAAGGAAGCTTTGGAAAAGCTTGGTGCTGATTCATTTTTGG
TTAGCCGTGACCAAGAACAGCTTCAGGCTGCCATTGGCACATTGGATGGA
ATCATCGATACAGTATCTGCTCAACACCCTCTGCTGCCTTTGATTGGGCT
GTTGAAGACTCACGGGAAGCTGGTTCTTGTTGGTGCTCCAGAGAAACCAC
TTGAGTTACCAGCCTTTCCTTTGCTCCAAGGGAGGAAGATAGTCGGAGGA
AGCATGATTGGAGGGATGAAGGAGACTCAAGAGATGATGGATTTCGCAGC
TAAACACAGCGTAAAACCAGATGTTGAAGTTATACCTATGGATTATGTGA
ACACTGCCATGGAGCGCCTTCTCAAAGCAGATGTCAAATACCGATTCGTC
ATTGACATTGGGAACACACTGAAGGCCGCTTGA
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protein sequence of Tc01v2_p007510.1

>Tc01v2_p007510.1 ID=Tc01v2_p007510.1|Name=Tc01v2_p007510.1|organism=Theobroma cacao|type=polypeptide|length=361bp
MTRLPEEEHPNKAFGWAARDTSGVLSPFKFSRRATGEKDVAFKVLYSGIC
HSDLHMVKNEWGSSVYPLVPGHEIVGEVTAVGSKVQKFKVGDRVGVGCMV
GSCQSCDSCTNKLENYCPKMILTYGAKYYDGTITYGGYSNNMVADEHFIV
RIPDNLPLDAAAPLLCAGITVYSPLRYYGLDKPDLHVGVVGLGGLGHVAV
KFAKAMGAKVTVISTSPNKKKEALEKLGADSFLVSRDQEQLQAAIGTLDG
IIDTVSAQHPLLPLIGLLKTHGKLVLVGAPEKPLELPAFPLLQGRKIVGG
SMIGGMKETQEMMDFAAKHSVKPDVEVIPMDYVNTAMERLLKADVKYRFV
IDIGNTLKAA*
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