Tc01v2_t007470.1

Overview
NameTc01v2_t007470.1
Unique NameTc01v2_t007470.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1089
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 3 ESTs, 81 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
Productprobable mannitol dehydrogenase
NoteProbable mannitol dehydrogenase
Cross References
External references for this mRNA
DatabaseAccession
GeneID18611427
GenbankXM_007047666.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc01v2_g007470Tc01v2_g007470Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc01v2_p007470.1Tc01v2_p007470.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto16121auto16121Theobroma cacaoexon
exon-auto16122auto16122Theobroma cacaoexon
exon-auto16123auto16123Theobroma cacaoexon
exon-auto16124auto16124Theobroma cacaoexon
exon-auto16125auto16125Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto16126auto16126Theobroma cacaoCDS
CDS-auto16127auto16127Theobroma cacaoCDS
CDS-auto16128auto16128Theobroma cacaoCDS
CDS-auto16129auto16129Theobroma cacaoCDS
CDS-auto16130auto16130Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc01v2_t007470.1 ID=Tc01v2_t007470.1|Name=Tc01v2_t007470.1|organism=Theobroma cacao|type=mRNA|length=1089bp
ATGGCGAACTCACCAGAAAAAGAGCACCCTGTTAAGACCGTCGGCTGGGC
TGCCAGGGACGCATCTGGTCATCTCTCTCCTTTCAACTTCTCCAGAAGGG
CAACCGGTGAAGAAGATGTGAGGCTTAAGGTGTTGTATTGTGGGATATGC
CATTCTGACCTTCACAATATCAAAAATGAATGGGGCCTCTCCATCTACCC
TATGATTCCTGGGCATGAAATTGTAGGGGAAGTGACTGAAGTAGGCAGCA
AAGTGAAAAAGGTTAGGGTGGGAGATAAAGTGGGAGTGGGATGCATGGTT
GGTGCTTGCCACAGCTGTGAGAGCTGTGCCAATGACCTGGAAAATTACTG
TCCTAAAGTGATACTAACCTACAATGGAATTTACTATGATGGAACAATGA
CATACGGAGGCTATGCAGATTCAATGGTTGCCAATGAACGCTACGTTGTC
CAGATCCCTGATGGCATGCCCCTTGACGCTGCAGCTCCGTTGCTTTGTGC
CGGAATCACTGTTTACAGTCCACTGAAATATTTTGGACTGGGTGAAGCTG
GAAAGCACATCGGCATTGTTGGCCTTGGTGGTCTGGGTCATGTAGCTGTT
AAATTTGCCAAGGCCTTGGGGTCCAAAGTAACAGTTATTAGCACGTCCCC
TAATAAAAAAACTGATGCCTTGGAACATCTTGGTGCTGATTCGTTTTTGG
TTAGCCGTGACCAAGGCGAAATGCAGGCCGCCATGGGTACTTTCGATGGA
ATCATTGACACAGTCTCTGCTGTTCATCCAATTATGCCATTGCTTGGTCT
TCTAAAATCCCATGGAAAGCTTATTATGGTGGGCGCACCCTACGAGCCAC
TTGAATTACCTGTCTTTTCTTTGATCATAGGAAGGAAGACGATGGCTGGG
AGTGGCATTGGAGGAATGAAAGAGACACAAGAGATGATTGATTTTGCAGC
AAAACACAACATAAAAGCAGACATCGAAGTTATTTCGATGGATTATGTGA
ACAAAGCGATGGAGAGACTTGGAAAGGGTGATGTTAGATACAGATTTGTA
ATCGACATTGGAAACACCTTGGTTGCCACCAAGCCTTGA
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protein sequence of Tc01v2_p007470.1

>Tc01v2_p007470.1 ID=Tc01v2_p007470.1|Name=Tc01v2_p007470.1|organism=Theobroma cacao|type=polypeptide|length=363bp
MANSPEKEHPVKTVGWAARDASGHLSPFNFSRRATGEEDVRLKVLYCGIC
HSDLHNIKNEWGLSIYPMIPGHEIVGEVTEVGSKVKKVRVGDKVGVGCMV
GACHSCESCANDLENYCPKVILTYNGIYYDGTMTYGGYADSMVANERYVV
QIPDGMPLDAAAPLLCAGITVYSPLKYFGLGEAGKHIGIVGLGGLGHVAV
KFAKALGSKVTVISTSPNKKTDALEHLGADSFLVSRDQGEMQAAMGTFDG
IIDTVSAVHPIMPLLGLLKSHGKLIMVGAPYEPLELPVFSLIIGRKTMAG
SGIGGMKETQEMIDFAAKHNIKADIEVISMDYVNKAMERLGKGDVRYRFV
IDIGNTLVATKP*
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