Tc01v2_t006840.1

Overview
NameTc01v2_t006840.1
Unique NameTc01v2_t006840.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1410
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Product1-aminocyclopropane-1-carboxylate synthase 3
Note1-aminocyclopropane-1-carboxylate synthase 8
Cross References
External references for this mRNA
DatabaseAccession
GeneID18611347
GenbankXM_007047563.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc01v2_g006840Tc01v2_g006840Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc01v2_p006840.1Tc01v2_p006840.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto14916auto14916Theobroma cacaoexon
exon-auto14917auto14917Theobroma cacaoexon
exon-auto14918auto14918Theobroma cacaoexon
exon-auto14919auto14919Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto14920auto14920Theobroma cacaoCDS
CDS-auto14921auto14921Theobroma cacaoCDS
CDS-auto14922auto14922Theobroma cacaoCDS
CDS-auto14923auto14923Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc01v2_t006840.1 ID=Tc01v2_t006840.1|Name=Tc01v2_t006840.1|organism=Theobroma cacao|type=mRNA|length=1410bp
ATGGGGCTGTTGTCCAGAAAAGCCACGTGCAACTCTCATGGGCAAGATTC
TCCTTACTTCCTAGGATGGCAAGAATACGAGAAAAACCCCTACGATGAAG
CCAAGAATCCAAAAGGAATTATTCAGATGGGTCTTGCAGAGAATCAGCTC
TCCTTTGATCTTCTTGAGTCTTGGATGGCCAAAAACCCAGACGCAGCTGG
TTTTAAGAGAGATGGGCAATCCATCTTCAGAGAGCTTGCTCTTTTCCAAG
ATTATCATGGCCTCCCTGCATTCAAAAAGGCATTGGTTGATTTCATGGCT
GAAATCAGAGGAAACAAAGTAACGTTTGATCCAAATCACATGGTACTCAC
CGCCGGTGCAACTGCTGCAAATGAAACTCTGATGTTCTGTCTCGCCGAAG
AAGGCGACGCTTTACTTCTTCCTACGCCATATTATCCAGGATTTGATAGA
GATCTCAAATGGCGACCTGGGGTTGAGATTGTACCAATCCAGTGTACCAG
CTTTAATCGCTTCCAAATCACTGCATCGGCCCTCGAAGAAGCTTATCAAC
AAGCACAAAAAAAGAACTTGAGGGTGAAAGGGGTCTTAGTCACCAACCCC
TCTAATCCATTGGGCACAACAATGACAAGAGGCGAATTAGACCTACTCAT
TAACTTCATTACTGCCAAAGAAATCCATTTAATAAGCGATGAAATTTACT
CCGGAACTGTTTTTAGCTCTCCAGCCTTCGTAAGTATCATGGAAGTATTA
AAAGATAGAAACCTCGAGAACACTGAAGTCTGGGACAGAGTTCACATTGT
TTATAGTCTTTCAAAGGATCTGGGTCTCCCTGGTTTTCGAGTTGGTGCAA
TTTACTCCAACGATCCCATTGTTGTGGCTGCCGCCACAAAAATGTCCAGC
TTTGGCCTAGTTTCTTCCCAGACTCAATACCTTCTCTCCGCCATGCTATC
CGATAAGAAATTCACGAAAGAATACATTTCCAAAAATCACAAGAGGCTCC
AAAAGCGACAGAGCAAGCTGGTTTCAGGCCTGGAAAAAGCCGGCATCAGC
TGCTTAGAAAGCAATGCCGGGTTGTTCTGTTGGGTTGACATGAGGCACCT
TTTGAGCTCCAACACATTTGAAGCAGAAATGGAGCTTTGGAAGAGAATAG
TTTACGATGTTAAACTAAACATTTCCCCCGGTTTTTCATGTCATTGCACT
GAACCAGGCTGGTTCCGAGTTTGCTTCGCAAACATGTCCGAAGACACCCA
AAAGCTCGCCATGCAACGATTGAAGTCCTTCGTTGATTCCATGACCATTA
ACAGCCAGAGCCACCAAGAATTAAAAAACGCAAGAAGAAAGTCCCGCACC
AAATGGGTTTTCCGGCTATCGTTCCAATCTTTCCATGATCGGGAGCAAGA
TGAACGATAA
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protein sequence of Tc01v2_p006840.1

>Tc01v2_p006840.1 ID=Tc01v2_p006840.1|Name=Tc01v2_p006840.1|organism=Theobroma cacao|type=polypeptide|length=470bp
MGLLSRKATCNSHGQDSPYFLGWQEYEKNPYDEAKNPKGIIQMGLAENQL
SFDLLESWMAKNPDAAGFKRDGQSIFRELALFQDYHGLPAFKKALVDFMA
EIRGNKVTFDPNHMVLTAGATAANETLMFCLAEEGDALLLPTPYYPGFDR
DLKWRPGVEIVPIQCTSFNRFQITASALEEAYQQAQKKNLRVKGVLVTNP
SNPLGTTMTRGELDLLINFITAKEIHLISDEIYSGTVFSSPAFVSIMEVL
KDRNLENTEVWDRVHIVYSLSKDLGLPGFRVGAIYSNDPIVVAAATKMSS
FGLVSSQTQYLLSAMLSDKKFTKEYISKNHKRLQKRQSKLVSGLEKAGIS
CLESNAGLFCWVDMRHLLSSNTFEAEMELWKRIVYDVKLNISPGFSCHCT
EPGWFRVCFANMSEDTQKLAMQRLKSFVDSMTINSQSHQELKNARRKSRT
KWVFRLSFQSFHDREQDER*
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