Tc01v2_t005480.1

Overview
NameTc01v2_t005480.1
Unique NameTc01v2_t005480.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1953
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
Productphosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and protein-tyrosine-phosphatase PTEN2A, transcript variant X1
NotePhosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and protein-tyrosine-phosphatase PTEN2A
Cross References
External references for this mRNA
DatabaseAccession
GeneID18611191
GenbankXM_018119498.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc01v2_g005480Tc01v2_g005480Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc01v2_p005480.1Tc01v2_p005480.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto12224auto12224Theobroma cacaoexon
exon-auto12225auto12225Theobroma cacaoexon
exon-auto12226auto12226Theobroma cacaoexon
exon-auto12227auto12227Theobroma cacaoexon
exon-auto12228auto12228Theobroma cacaoexon
exon-auto12229auto12229Theobroma cacaoexon
exon-auto12230auto12230Theobroma cacaoexon
exon-auto12231auto12231Theobroma cacaoexon
exon-auto12232auto12232Theobroma cacaoexon
exon-auto12233auto12233Theobroma cacaoexon
exon-auto12234auto12234Theobroma cacaoexon
exon-auto12235auto12235Theobroma cacaoexon
exon-auto12236auto12236Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto12237auto12237Theobroma cacaoCDS
CDS-auto12238auto12238Theobroma cacaoCDS
CDS-auto12239auto12239Theobroma cacaoCDS
CDS-auto12240auto12240Theobroma cacaoCDS
CDS-auto12241auto12241Theobroma cacaoCDS
CDS-auto12242auto12242Theobroma cacaoCDS
CDS-auto12243auto12243Theobroma cacaoCDS
CDS-auto12244auto12244Theobroma cacaoCDS
CDS-auto12245auto12245Theobroma cacaoCDS
CDS-auto12246auto12246Theobroma cacaoCDS
CDS-auto12247auto12247Theobroma cacaoCDS
CDS-auto12248auto12248Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc01v2_t005480.1 ID=Tc01v2_t005480.1|Name=Tc01v2_t005480.1|organism=Theobroma cacao|type=mRNA|length=1953bp
ATGAACTCAGAGTCTGCGGATTCCTCATCTCAACCTCTCGCTAAAGCTTC
TGATGGTGAAACTCCTGCTGAAGCCACTGATGTTAAACCGCCAGCGAACA
CTAGTGATGCCAAACATCAAGCAAAAGCTAATGAGGTTGAACCTCCTGCC
AGAGCTGTTGATGTTGAACCTCCAAAGGCCAGTGATAATCCACCTACTGT
CACTGCAAAAACTAATTCCTCGTATGATTCCCCACCATCTGTGTTATCCT
CCACTGCCATATCTTCTTGGGCAAGAAATTTGAAATTTCCACAGCCTGTA
GCACCGTCACAAGGCTCTCAAGCTGGAAATGCTGGGACTTCAGCTTTTGC
GCGCTTCACCAGTGGGCTTGGATTGCGGTTGCAATCAATGAGTCTACCAC
CGGATGATAGTGCAGAGCATACCTCTACAGCGACACAAGCTGTTCTTGAA
TCATTCAAAAAGGGTATAGTTGATTCATCTCGGAGTGCAGTGAAGGCAGT
GCAGGTCAAGGCACGCCATATTGTCTCACAAAACAAACGGAGATACCAGG
AGGGAGAGTTTGATTTGGATATGACTTATATCACTGAGAATATAATTGCT
ATGGGGTTTCCTGCTGGTGATCTAAGCTCAGGGCTTTTTGGATTCTTTGA
GGGCTTCTATCGAAATCACATGGAAGAAGTAATCAAGTTTTTTGAAACTC
ATCACAAGGGAAGATATAAAGTGTACAATTTGTGTTCAGAGAGGTTGTAT
GATGCATCACTATTTCAGGGGAAGGTTGCAAGTTTCCCATTTGATGACCA
CAATTGCCCTCAACTTCAACTCATAAAATCCTTTTGTCAAAGTGCATACT
CATGGCTGAAGGAGGACATAGAAAATGTGGTGGTTGTTCATTGTAAAGCT
GGTATGGGAAGGACAGGATTAATGATTTGCAGTCTTCTTTTATTCCTTAA
GTTCTTTCCGACAGCTGAAGAGGCCATCGACTACTTCAACCAGAAAAGAT
GCATAGACGGGAAAGCTCTGGTTCTCCCAAGTCAGATTAGATATGTCAAA
TACTTTGAGTGTATCCTAAGACACTTCAATGGAGAAAATCAGCCTGGACA
TAGGTGCATGCTTAGGGGGTTCCGGCTTCATAAGTGTCCCTACTGGATTA
GGCCCTCTATTACTATCTCCAATCACAATGGAACTTTGTTCTCTACAAGA
AAGCATCCAAAAACGAAGGATTTAATGCCAGAAGATTTCTGGATTAAGGC
ACCTAAGAAAGGGATAGTGGTTTTTGCTCTGCCTGGGCAGCCTGGTCTCA
CAGAATTGGTGGGTGACTTCAAAATCCAATTTCATGACCGTCAAGGAGAT
TTCTACTGTTGGTTAAATACAACAATGATAGAGAACAGAACAATACTGGA
CACCTCTGATCTTGACGGTTTTGACAAGATAACTGTGCCTTACCCTGGAT
TCAAGGTTGAACTGGTAATGGTAGACTATGACGGTATACCACAGTCAAAT
TCTAATACTAATTCTGTCAACGAAGAAACTCAGGGTAACTCCAGTTACAC
CAAGGATGGAGTCACGGCCCGTTCAAAACATAGCAAAGTTTCTGGAAATG
AAGACAATGGTGATGTATTCTCAGACAGCGATGGGGAGGAATCAGGGGCT
TCAAGGAGTAGGCAGACTCAAGCTGCTGGAGCTGGACCTGCAGTCTCCAG
CCATCTAACTAACCCTGCAGCTGAGCAAATAGGGACGTCCACGCATGGAA
CTCATCAACTATCAGTCAAAAATCAAGAGCGAGCGTTGAGCAATGCTTCC
AAAGACGTAAGCATTAATGGAGTTGGCAAACCTTGCTCAGGACTTGAGAT
CCCCAATCTGGACTCCATGGGAGCAAGTGATATCAAGGTGATTGCTGCTG
ATGCATCAGTCTTCAGTTTTGGGGATGAAGAAGAAGATTATGAAAGCGAA
TGA
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protein sequence of Tc01v2_p005480.1

>Tc01v2_p005480.1 ID=Tc01v2_p005480.1|Name=Tc01v2_p005480.1|organism=Theobroma cacao|type=polypeptide|length=651bp
MNSESADSSSQPLAKASDGETPAEATDVKPPANTSDAKHQAKANEVEPPA
RAVDVEPPKASDNPPTVTAKTNSSYDSPPSVLSSTAISSWARNLKFPQPV
APSQGSQAGNAGTSAFARFTSGLGLRLQSMSLPPDDSAEHTSTATQAVLE
SFKKGIVDSSRSAVKAVQVKARHIVSQNKRRYQEGEFDLDMTYITENIIA
MGFPAGDLSSGLFGFFEGFYRNHMEEVIKFFETHHKGRYKVYNLCSERLY
DASLFQGKVASFPFDDHNCPQLQLIKSFCQSAYSWLKEDIENVVVVHCKA
GMGRTGLMICSLLLFLKFFPTAEEAIDYFNQKRCIDGKALVLPSQIRYVK
YFECILRHFNGENQPGHRCMLRGFRLHKCPYWIRPSITISNHNGTLFSTR
KHPKTKDLMPEDFWIKAPKKGIVVFALPGQPGLTELVGDFKIQFHDRQGD
FYCWLNTTMIENRTILDTSDLDGFDKITVPYPGFKVELVMVDYDGIPQSN
SNTNSVNEETQGNSSYTKDGVTARSKHSKVSGNEDNGDVFSDSDGEESGA
SRSRQTQAAGAGPAVSSHLTNPAAEQIGTSTHGTHQLSVKNQERALSNAS
KDVSINGVGKPCSGLEIPNLDSMGASDIKVIAADASVFSFGDEEEDYESE
*
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