Tc01v2_t004030.1

Overview
NameTc01v2_t004030.1
Unique NameTc01v2_t004030.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1602
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
Productcytochrome P450 CYP82D47-like
NoteCytochrome P450 82C4
Cross References
External references for this mRNA
DatabaseAccession
GeneID108660616
GenbankXM_018114848.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc01v2_g004030Tc01v2_g004030Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc01v2_p004030.1Tc01v2_p004030.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto9358auto9358Theobroma cacaoexon
exon-auto9359auto9359Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto9360auto9360Theobroma cacaoCDS
CDS-auto9361auto9361Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc01v2_t004030.1 ID=Tc01v2_t004030.1|Name=Tc01v2_t004030.1|organism=Theobroma cacao|type=mRNA|length=1602bp
ATGGATCCTCTCCTGCACTACCTGTTTACTTTAGTCTGCAGCCTTGTTGC
CCTTTTGAGTTGCATTTACTTTTATCAGTCGAAGAAACCAAGCACTCACA
GGAAAAGAGTCTGCACTGCGCCACAAGCTGGCGGTGCGTTACCTGTCATC
GGCCACATGCACCTCTTGGGTGGCCAGCAACTCACCCACAAAACATTAGG
TGCCATGGCTGACAAATATGGACCTGTTTTTTCCATAAGGCTAGGATCAC
ACAGCGCCCTGGTTTTAAATAGCTGGGAAATGGCCAGAGAGTGTTTCACC
GTCCATGATAAAGTCTTCTCCACTAGACCAGTCCTTACTGCCTCAAAGGT
TCTAGGCTATAATTATGCGATGTTCGGGTTCGCTCCTTATGGATCCTACT
GGCGCGAGATTCGTAGAATTGCTACAATTGAACTTCTGTCAAGCCACCGG
ATTGATATGCTCAAACATATACGTGCTTCAGAGGTAAAGACTGCAGTAAG
AGAATTGTACAAGTCATGGCTTAGCAAAGGTGGTGGAGAAACTGGAGTAT
TGGTAGATATGAAACAGTGGTTCGGCGATCTAACTCATAATATTGCTCTG
AGAATGGTGGGAGGGAAAAGGTTCTTCGGACCGAATGCTGATTGTGAGGA
AGCAGAAGCACGAAGGTGTCAAAAAGTGATGAGGGATTCCGCTTACCTGT
TTGGAGTGTTTGTCGTGTCCGATGCATTACCATTTATTGGGTGGTTGGAT
TTTCAAGGATATGAAAAAGCCATGAAAAGAACTGCAAAAGAATTGGACAT
TCTACTAGGAGGGTGGCTCGAGGAGCATAAGCAGAAGAAACATTTAGGTG
GAGGGTTGAAAAAAGAGCAGGATTTCATGGATGTGATGCTGAACATCCTG
GAAGACGCCAAGATTACTAGTTTCGATGCCGACACCATCAACAAGGCTAC
TTGCTTGAATTTAGTTTTGGCAGGGAGTGACACAACCATGATCACTCTCA
CCTGGGCCCTATCTTTGCTACTGAACAATCCTCGCGTGCTAAAGAGGGCC
CAAGATGAGCTTGACATGCACGTTGGAAAGGATAGACTATTGGAAGAATC
TGACATCAGAAACCTGGTCTACCTTCATGCCATTGTCAAGGAAACACTGC
GCTTATACCCGCCTAGTCCAATCATTTTCCGGGCATCAATGGAAGATTGC
ACTCTCTCGACTGGCTACCACATTCCGGCAGGTACACGATTAATGGTAAA
TGCCTGGAAGATTCAACGTGACGAGCGTGTGTGGCCAGACCCACATGTTT
TTAAACCTGAGAGATTTTTAACTAGCCACAAGGATATGGAGTTTCGAGGC
CAGACTTTTGAACTCATCCCTTTTGGCTCGGGAAGAAGGTCCTGCCCTGG
GGTCTCACTAGCCCTCCAGGTGGTGCATTCGGCACTGGCTAGTTTCTTAC
AAAGTTTTGAAGTTTCTAAGCCATCGAAACTCGAAGATATAGATATGACA
GAAAGTACAGGATTAACAAATCTGAAAGCAACCCCGCTTGAAGTTCTCTT
TACTCCACGTCTTGATTCCAAGCTCTATGGTTTGGGCACAGAATTAATAT
AG
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protein sequence of Tc01v2_p004030.1

>Tc01v2_p004030.1 ID=Tc01v2_p004030.1|Name=Tc01v2_p004030.1|organism=Theobroma cacao|type=polypeptide|length=534bp
MDPLLHYLFTLVCSLVALLSCIYFYQSKKPSTHRKRVCTAPQAGGALPVI
GHMHLLGGQQLTHKTLGAMADKYGPVFSIRLGSHSALVLNSWEMARECFT
VHDKVFSTRPVLTASKVLGYNYAMFGFAPYGSYWREIRRIATIELLSSHR
IDMLKHIRASEVKTAVRELYKSWLSKGGGETGVLVDMKQWFGDLTHNIAL
RMVGGKRFFGPNADCEEAEARRCQKVMRDSAYLFGVFVVSDALPFIGWLD
FQGYEKAMKRTAKELDILLGGWLEEHKQKKHLGGGLKKEQDFMDVMLNIL
EDAKITSFDADTINKATCLNLVLAGSDTTMITLTWALSLLLNNPRVLKRA
QDELDMHVGKDRLLEESDIRNLVYLHAIVKETLRLYPPSPIIFRASMEDC
TLSTGYHIPAGTRLMVNAWKIQRDERVWPDPHVFKPERFLTSHKDMEFRG
QTFELIPFGSGRRSCPGVSLALQVVHSALASFLQSFEVSKPSKLEDIDMT
ESTGLTNLKATPLEVLFTPRLDSKLYGLGTELI*
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