Tc01v2_t001620.1

Overview
NameTc01v2_t001620.1
Unique NameTc01v2_t001620.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length651
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
ProductWEB family protein At2g17940
NotePutative WEB family protein At2g17940
Cross References
External references for this mRNA
DatabaseAccession
GeneID108660988
GenbankXM_018116460.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc01v2_g001620Tc01v2_g001620Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc01v2_p001620.1Tc01v2_p001620.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto4383auto4383Theobroma cacaoexon
exon-auto4384auto4384Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto4385auto4385Theobroma cacaoCDS
CDS-auto4386auto4386Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc01v2_t001620.1 ID=Tc01v2_t001620.1|Name=Tc01v2_t001620.1|organism=Theobroma cacao|type=mRNA|length=651bp
ATGGAGAGGGAGGAAGGCGGCGTCATTGTCGTCGGACGGGCGGAGATTGA
CACAAGAGCGCCTTTTCGGTCTGTTAAGGAGGCAGTCATGTTGTTCGGAG
AAAAAGTTCTGGTTGGAGAAATTTATGCTAGCAAGCTCAAAGAGATGAAG
GCTCAAGCAGGAGCAAATGGGCAGAGTCAATCCAAGCTTGCAGCCCTGAC
AGCCGAGCTAGAGGAAACAAAGCAAAGCCTGCAGAAGGCCAGAGAGGAAG
GTAACTTGATGTCATACCGCATAAAGACACTAAGAGAAGAGCTCGAACTA
ACAAAAAAGGAGCTGCAACAGCTCAAGGCAAGAGAGTTTGATCAGAAGCA
GCGGTTTGATCCTGATATGGAAGACTTCAAGTTCATGGAAAACGCAACCA
AGATAGGCATCATGACACAGGATGAAGAGCCAGAGGAGTTCCAAAAGAAG
AGATATGTGAAATTTGCTAGCCCTCCTTCACTAGCTCAAGTTATTGTCAA
CAGAGAGGAAAAGCTGGAAAGACAAGCCCCGGTTAAGAAAGTTAGAAGGA
AGTCATTAATCCCAGTGATAGGATGGCTCTTTTACAAGAAGAAGGGAAGT
CAAGAAGATGATCAGTCCCTAAGAGCAAATCAGGTTCAGAGGCATTATTA
G
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protein sequence of Tc01v2_p001620.1

>Tc01v2_p001620.1 ID=Tc01v2_p001620.1|Name=Tc01v2_p001620.1|organism=Theobroma cacao|type=polypeptide|length=217bp
MEREEGGVIVVGRAEIDTRAPFRSVKEAVMLFGEKVLVGEIYASKLKEMK
AQAGANGQSQSKLAALTAELEETKQSLQKAREEGNLMSYRIKTLREELEL
TKKELQQLKAREFDQKQRFDPDMEDFKFMENATKIGIMTQDEEPEEFQKK
RYVKFASPPSLAQVIVNREEKLERQAPVKKVRRKSLIPVIGWLFYKKKGS
QEDDQSLRANQVQRHY*
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