Tc01v2_t001460.1

Overview
NameTc01v2_t001460.1
Unique NameTc01v2_t001460.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length924
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 1 EST, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
Productcalmodulin-lysine N-methyltransferase
NoteS-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Cross References
External references for this mRNA
DatabaseAccession
GeneID18610756
GenbankXM_007046616.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc01v2_g001460Tc01v2_g001460Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc01v2_p001460.1Tc01v2_p001460.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto4120auto4120Theobroma cacaoexon
exon-auto4121auto4121Theobroma cacaoexon
exon-auto4122auto4122Theobroma cacaoexon
exon-auto4123auto4123Theobroma cacaoexon
exon-auto4124auto4124Theobroma cacaoexon
exon-auto4125auto4125Theobroma cacaoexon
exon-auto4126auto4126Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto4127auto4127Theobroma cacaoCDS
CDS-auto4128auto4128Theobroma cacaoCDS
CDS-auto4129auto4129Theobroma cacaoCDS
CDS-auto4130auto4130Theobroma cacaoCDS
CDS-auto4131auto4131Theobroma cacaoCDS
CDS-auto4132auto4132Theobroma cacaoCDS
CDS-auto4133auto4133Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc01v2_t001460.1 ID=Tc01v2_t001460.1|Name=Tc01v2_t001460.1|organism=Theobroma cacao|type=mRNA|length=924bp
ATGGAAACTAACAATAACAGTTCAAATTCGAAGGCTTCAGCTTCTTCGCT
GAGATGGGGAATCCTTCGCCGAGCTGTTCTACATCGGGCCAAAAATACTG
ATGAGTCTCAATTGGGAATGAAACGCATTTCCAGAAAAGCCGCAAAAGGA
TTCAACTTGATACCGTGGCAGGTGCTCCACCATGATCACGACTCTCGAGA
TGCCCGACTCTGCTACACCTTGCCCGTTCAGGGATCTCCCAAGCTTGTTT
TAACCCAGAGAGTGGATGATACTGCCGACCTCAGTGATTTTGAGATGTGT
AACAGATACAACATTGACAATACCGGGCTTGTCTGTCAGTGGCCATCTGA
AGATGTCCTTGCCTATTTTTGCTTATCACATGCATACATGTTCAGGTCTA
AAAGAGTTATTGAGCTTGGATCAGGTTATGGCTTAGCTGGATTAGCCATT
GCAGCAGCCACAGAGGCATTCGAAGTTGTGATTTCAGATGGAAATCCTCA
AGTGGTTGATTATATTCAGCATAATATTAACATGAATTCCGGAGCATTTG
GTGACACAAGAGTGAAGTCCATGAACTTGCACTGGCATCAGAAAGAAATT
TCAAATCTCTCTCACACGTTTGATGTCATTGTTGCAAGTGATTGCACCTT
TTTCAAGGAATTCCACAAAGATCTTGCTCGAATAACTCAGCTCTTGCTGA
AAAATGCGGGACCATCTGAAGCTATATTTTTCAGCCCTAAAAGAGGTAAT
TCATTGGATAAGTTTCTGGAGGAAATTCGAGATAATGGCTTGCTTTTCAG
CATAGCAGAGAGCTATGACACTGAAATCTTGAGGCGTCATCAATGCTTCA
TGAATGGTGACGATTCCTGGCCTGGCTACGAAAAAGATCATTGCTACCCG
TTATTAATTAGAATTACCCGATGA
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protein sequence of Tc01v2_p001460.1

>Tc01v2_p001460.1 ID=Tc01v2_p001460.1|Name=Tc01v2_p001460.1|organism=Theobroma cacao|type=polypeptide|length=308bp
METNNNSSNSKASASSLRWGILRRAVLHRAKNTDESQLGMKRISRKAAKG
FNLIPWQVLHHDHDSRDARLCYTLPVQGSPKLVLTQRVDDTADLSDFEMC
NRYNIDNTGLVCQWPSEDVLAYFCLSHAYMFRSKRVIELGSGYGLAGLAI
AAATEAFEVVISDGNPQVVDYIQHNINMNSGAFGDTRVKSMNLHWHQKEI
SNLSHTFDVIVASDCTFFKEFHKDLARITQLLLKNAGPSEAIFFSPKRGN
SLDKFLEEIRDNGLLFSIAESYDTEILRRHQCFMNGDDSWPGYEKDHCYP
LLIRITR*
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