Tc01v2_t001080.1

Overview
NameTc01v2_t001080.1
Unique NameTc01v2_t001080.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length951
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 1 EST, 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
Productperoxidase 64
NotePeroxidase 64
Cross References
External references for this mRNA
DatabaseAccession
GeneID18610717
GenbankXM_007046549.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc01v2_g001080Tc01v2_g001080Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc01v2_p001080.1Tc01v2_p001080.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto3269auto3269Theobroma cacaoexon
exon-auto3270auto3270Theobroma cacaoexon
exon-auto3271auto3271Theobroma cacaoexon
exon-auto3272auto3272Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto3273auto3273Theobroma cacaoCDS
CDS-auto3274auto3274Theobroma cacaoCDS
CDS-auto3275auto3275Theobroma cacaoCDS
CDS-auto3276auto3276Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc01v2_t001080.1 ID=Tc01v2_t001080.1|Name=Tc01v2_t001080.1|organism=Theobroma cacao|type=mRNA|length=951bp
ATGGCTTTGATCGTAGCGCTGTTGAGCTCACTTATCGTTCTCTCGGCATC
TTCACCAGCTGATGCTCTTAGCTTGAATCACTATGAGAAAACGTGCCCTG
ATGTTGAGTCAATTGTTTCAAAGGCCGTCCAGAGCGAAACAAGAAAGGAT
GAGACAATCCCTGCTGCCCTTCTGCGGCTGCATTTTCATGACTGTTTCAT
AAGGGGTTGTGATGCTTCTGTGCTGTTGTACTCCAAGGGAAATAATAAAG
CAGAAAAAGATGGGCCTGCCAACCTTTCTTTGCATGGATTTTATGTTATT
GAAGGTGCTAAGAAAGAAATTGAAGCTTCGTGCCCTGGTGTAGTTTCATG
TGCTGATATTTTGGCTTTGGCTGCAAGGGATGCTGTCGTGCTTTCTGGAG
GTCCAACGTGGGATGTGCCCAAGGGAAGAAAAGATGGGAGAACATCGAAG
GCTAGTGAAACCCTACAGTTGCCAGCTCCAACCTTCACCATATCTCAACT
GCAACAAAGCTTCTCTCAGAGAGGTCTATCCATGGATGACCTTGTAGCTC
TTTCAGGAGGCCACACTATTGGATTTTCACACTGTTCATCCTTCGTGAAC
AGAATCCGCAACTTCAACGCAACGCACGACATAGACCCTAAGATGCATCC
CTCATTTGCAGCGAGCTTAAGGAGTGTTTGCCCGATCAACAACAAGGCAA
AGAACGCTGGAGCGACTATGGATCCTTCTTCAACAACTTTTGATAACACG
TACTACAAGCTGATCCTTCAGCGCAAGGCCCTGTTTTCTTCAGACCAAGC
CCTGCTCACAAATCCAAAGACCAAAAATTTGGTACACAAGTTTGCCACAT
CAAAACAAGCTTTTGAGAAGGCTTTCGTGAACTCTATGATCAAAATGAGT
AGCCTGAACGGTGGACAAGAGATTAGAAAAGATTGTAGGGTAGTAAACTA
A
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protein sequence of Tc01v2_p001080.1

>Tc01v2_p001080.1 ID=Tc01v2_p001080.1|Name=Tc01v2_p001080.1|organism=Theobroma cacao|type=polypeptide|length=317bp
MALIVALLSSLIVLSASSPADALSLNHYEKTCPDVESIVSKAVQSETRKD
ETIPAALLRLHFHDCFIRGCDASVLLYSKGNNKAEKDGPANLSLHGFYVI
EGAKKEIEASCPGVVSCADILALAARDAVVLSGGPTWDVPKGRKDGRTSK
ASETLQLPAPTFTISQLQQSFSQRGLSMDDLVALSGGHTIGFSHCSSFVN
RIRNFNATHDIDPKMHPSFAASLRSVCPINNKAKNAGATMDPSSTTFDNT
YYKLILQRKALFSSDQALLTNPKTKNLVHKFATSKQAFEKAFVNSMIKMS
SLNGGQEIRKDCRVVN*
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