Tc01v2_t000510.1

Overview
NameTc01v2_t000510.1
Unique NameTc01v2_t000510.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1137
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
Productdehydrodolichyl diphosphate synthase 6, transcript variant X2
NoteDehydrodolichyl diphosphate synthase 6
Cross References
External references for this mRNA
DatabaseAccession
GeneID18610654
GenbankXM_007046452.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc01v2_g000510Tc01v2_g000510Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc01v2_p000510.1Tc01v2_p000510.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto2023auto2023Theobroma cacaoexon
exon-auto2024auto2024Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto2025auto2025Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc01v2_t000510.1 ID=Tc01v2_t000510.1|Name=Tc01v2_t000510.1|organism=Theobroma cacao|type=mRNA|length=1137bp
ATGCGCAATTGCCAAATGGGAAATAAAGTGGGAAAATATGGTGGCAATGG
TGTGAATAAGCTCTTTGGCGGCATAGCTAGTTTCCTGAGGAGATGTTTAT
TTCGAGTTCTATCTGTGGGTCCCTTGCCTTCTCACCTCGCCTTTATCATG
GATGGAAACCGAAGGTATGCAAAGAAGAACAATCTGGAAGAAGGGGATGG
CCACAAGGCTGGCTATCTAGCTCTAATGTCTTTGCTTCATTACTGCTATG
AATTAGGAATCAAGTATGTTACTGTCTATGCCTTCAGCATTGAAAATTTT
AAGAGGCAGCCGGATGAGGTTCGAAGCTTAATGGATCTAATGCTAGAGAA
GATTGAGGGTTTGCTTATGGAAGAAAGCATTGTGAATCAGTATGGCATCA
GGGTGTATTTTATAGGTAATTTGCAACTCTTGAGTGAGCCTGTCAGGGCT
GCTGCTGAAAAGGTGATGCAGGTCACTGCTAACAATGATAAGGCTGTGCT
TTTAGTGTGTGTGGCCTATACTTCATCCGATGAAATTGTGCATGCTGTCG
ATGAATCCTGTAAAGATAAAAGTGGTAAAATTCGACTGTGGAACTCAGAC
GAAGCTTACAATAGCGTGATAGAAAAAGAGTGTAAGAAGATTAATGGTAT
GATTGTGCATGATGTTCAAAATTTGTGTAATGATAGGTCTGATGAATCTA
TCGTTTTAAAGGCCAGCAGAGGTTGCAATGGGGTGATTGGAGGATTTCAG
ACAGAAAATGGTGTCACTACATATCATGCCCATGAATCTTTTGAGTCTAA
GTGGGATGAAGTTCTAACAACCAAGGCAACCAAAGCAGGCGAATTTTCTG
CTGTGGAGGTTGAAGGTTGTGAGAATATGCGAGAGGAGCATCCTGCAATA
AAGCTGGTAGATGTTGAGAAGCACATGTATATGGCGGTAGCACCTGATCC
TGACATACTAATTCGAAGCTCTGGTGAGACCCGCCTGAGTAATTTTCTAC
TTTGGCAAACCAGTCACTGCCCATTGTATTCTCCCGCTGTGTTGTGGCCA
GAGATAGGTTTGTGGCAGTTGGTGTGGGCGATATTAAACTTCCAACGAAC
CCATTCTTATTTGGAGAAAAAGAAGAAACAGTTATAG
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protein sequence of Tc01v2_p000510.1

>Tc01v2_p000510.1 ID=Tc01v2_p000510.1|Name=Tc01v2_p000510.1|organism=Theobroma cacao|type=polypeptide|length=379bp
MRNCQMGNKVGKYGGNGVNKLFGGIASFLRRCLFRVLSVGPLPSHLAFIM
DGNRRYAKKNNLEEGDGHKAGYLALMSLLHYCYELGIKYVTVYAFSIENF
KRQPDEVRSLMDLMLEKIEGLLMEESIVNQYGIRVYFIGNLQLLSEPVRA
AAEKVMQVTANNDKAVLLVCVAYTSSDEIVHAVDESCKDKSGKIRLWNSD
EAYNSVIEKECKKINGMIVHDVQNLCNDRSDESIVLKASRGCNGVIGGFQ
TENGVTTYHAHESFESKWDEVLTTKATKAGEFSAVEVEGCENMREEHPAI
KLVDVEKHMYMAVAPDPDILIRSSGETRLSNFLLWQTSHCPLYSPAVLWP
EIGLWQLVWAILNFQRTHSYLEKKKKQL*
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