Tc01v2_t000420.1

Overview
NameTc01v2_t000420.1
Unique NameTc01v2_t000420.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length318
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Productuncharacterized LOC18610647
NoteUncharacterized protein
Cross References
External references for this mRNA
DatabaseAccession
GeneID18610647
GenbankXM_018125226.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc01v2_g000420Tc01v2_g000420Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc01v2_p000420.1Tc01v2_p000420.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto1699auto1699Theobroma cacaoexon
exon-auto1700auto1700Theobroma cacaoexon
exon-auto1701auto1701Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto1702auto1702Theobroma cacaoCDS
CDS-auto1703auto1703Theobroma cacaoCDS
CDS-auto1704auto1704Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc01v2_t000420.1 ID=Tc01v2_t000420.1|Name=Tc01v2_t000420.1|organism=Theobroma cacao|type=mRNA|length=318bp
ATGTCGGCATTCCTAATCGTGGTGGCGATGCAAATTCTTCAAAAGTCACT
GAATCTAAATCATTTGTATGGGACAAGTGGAGAAGAAAGAGATGATCAAA
TGTTCGTTGAGGCACTTCTTCAGCTCTTATGGCGTGTACGTGCACAAGGG
GACTCTCCCATTTCGGAAAAATTCAAAACAGAGAGCTATGATGACTTGAA
AGGGAAGCGTGGGACTCACCAATCAAATTCAACAAGCTGGAGGAGGGATT
TCTGCACGGCCACCTTCCCAACAAAGGGTTCATTAGATTCACAGCCATCA
CCTAGCTCATCAACATAA
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protein sequence of Tc01v2_p000420.1

>Tc01v2_p000420.1 ID=Tc01v2_p000420.1|Name=Tc01v2_p000420.1|organism=Theobroma cacao|type=polypeptide|length=106bp
MSAFLIVVAMQILQKSLNLNHLYGTSGEERDDQMFVEALLQLLWRVRAQG
DSPISEKFKTESYDDLKGKRGTHQSNSTSWRRDFCTATFPTKGSLDSQPS
PSSST*
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